RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CSAG2Q9Y5P2 127 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 SCINQ9Y6U3 715 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 DYTNA2CJ06 578 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 OR5H15A6NDH6 313 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 OR52A4PA6NMU1 304 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 BTN3A1O00481 513 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 KDM1AO60341 852 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 TMCC2O75069 709 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 ATE1O95260 518 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 TSPAN12O95859 305 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 EPOP01588 193 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 COX6A1P12074 109 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 DNASE1P24855 282 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PSMA3P25788 255 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 CHRNB4P30926 498 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 SHMT2P34897 504 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PPM1FP49593 454 aaPredicted RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 EPHB1P54762 984 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 LTBQ06643 244 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 BECN1Q14457 450 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 KIR2DS3Q14952 304 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 LAPTM4AQ15012 233 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 NKG7Q16617 165 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 TCTE1Q5JU00 501 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 FAM83HQ6ZRV2 1179 aaPredicted RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 GPR135Q8IZ08 494 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 CPSF7Q8N684 471 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 MLKLQ8NB16 471 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 OR11G2Q8NGC1 345 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 LILRB4Q8NHJ6 448 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 SLC20A1Q8WUM9 679 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 EID2BQ96D98 161 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 MVB12AQ96EY5 273 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 MCEEQ96PE7 176 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PCDHB18PQ96TA0 734 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 OSGEPL1Q9H4B0 414 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 DHX35Q9H5Z1 703 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 SUDS3Q9H7L9 328 aaPredicted RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 POLG2Q9UHN1 485 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 CDC23Q9UJX2 597 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PRKAB1Q9Y478 270 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PHF3Q92576 2039 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 IGHV1-45A0A0A0MS14 117 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 A8MX80 341 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 MAP2K7O14733 419 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 DAPK3O43293 454 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 UNC5CO95185 931 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 ST6GAL1P15907 406 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 MX2P20592 715 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 CDH3P22223 829 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PRDX3P30048 256 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 HMGCLP35914 325 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PCYT1AP49585 367 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PRLHRP49683 370 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 GUCA2AQ02747 115 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 NIPAL4Q0D2K0 466 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 MAMLD1Q13495 774 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 GALNT3Q14435 633 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 KHDC1Q4VXA5 237 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 TDRD12Q587J7 1177 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 SHEQ5VZ18 495 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 HGSNATQ68CP4 663 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 DENND2CQ68D51 928 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 SUSD1Q6UWL2 747 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 PRSS57Q6UWY2 283 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 CEP97Q8IW35 865 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 GHDCQ8N2G8 530 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 RASGEF1AQ8N9B8 481 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 SIMC1Q8NDZ2 872 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 SUN3Q8TAQ9 357 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 IMP4Q96G21 291 aaKnown RBP4.4□□□□□ -1.71
SNCA-213ENST00000618500 ZNF559Q9BR84 538 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 ZNF670Q9BS34 389 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 RIC8BQ9NVN3 520 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 ACTR10Q9NZ32 417 aa4.4□□□□□ -1.71
SNCA-213ENST00000618500 CRYBG3Q68DQ2 2970 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 IGLV3-16A0A075B6K0 115 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 POM121CA8CG34 1229 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 OR2B3O76000 313 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 TOXO94900 526 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 CDK14O94921 469 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 F12P00748 615 aaPredicted RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 CCDC172P0C7W6 258 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PRR35P0CG20 571 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 ACPPP15309 386 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 ARG2P78540 354 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 RELAQ04206 551 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PPIDQ08752 370 aaKnown RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 KYNUQ16719 465 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 HIBCHQ6NVY1 386 aaPredicted RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 CRTC3Q6UUV7 619 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 TMEM205Q6UW68 189 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 NETO2Q8NC67 525 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 LPCAT1Q8NF37 534 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 FAM57AQ8TBR7 257 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms