RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 IFT52Q9Y366 437 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 PRORSD1PA6NEY8 169 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CLDN11O75508 207 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 HMGN1P05114 100 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CYP2B6P20813 491 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ARFIP1P53367 373 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MEP1AQ16819 746 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CAPN13Q6MZZ7 669 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MMAAQ8IVH4 418 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TOR1AIP2Q8NFQ8 470 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 SPPL2BQ8TCT7 592 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 NCSTNQ92542 709 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 NPLQ9BXD5 320 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 FOLH1BQ9HBA9 442 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 SPTLC1O15269 473 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MID1O15344 667 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TRIM3O75382 744 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CREG1O75629 220 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GOT2P00505 430 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CXCR3P49682 368 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CLCN4P51793 760 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CEACAM7Q14002 265 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 FBXO42Q6P3S6 717 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 VN1R5Q7Z5H4 357 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM80Q96HE8 168 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 BCO2Q9BYV7 579 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 DERL2Q9GZP9 239 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MTMR10Q9NXD2 777 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TAS2R9Q9NYW1 312 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 H3BMQ9 156 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TLR4O00206 839 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 SDHDO14521 159 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 PLD2O14939 933 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 AXIN1O15169 862 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 EEDO75530 441 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CNTN5O94779 1100 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ACADLP28330 430 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ALDH7A1P49419 539 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GTF2A2P52657 109 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ZNHIT3Q15649 155 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■□□□ 12
CUL4A-212ENST00000617546 EIF5AL1Q6IS14 154 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CYP4V2Q6ZWL3 525 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 CPNE8Q86YQ8 564 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 YAF2Q8IY57 180 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 DAW1Q8N136 415 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 SLC15A4Q8N697 577 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 TNFAIP8L1Q8WVP5 186 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 COG8Q96MW5 612 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MUS81Q96NY9 551 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 HEPHQ9BQS7 1158 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 BRD9Q9H8M2 597 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GPN2Q9H9Y4 310 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 SGK2Q9HBY8 427 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 NT5C1B-RDH14C9J2C7 533 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 FAM47E-STBD1D6RA91 191 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 hCG_2039718K7EN88 272 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 LRATO95237 230 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 RLN1P04808 185 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 COL6A1P12109 1028 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 HSPA14Q0VDF9 509 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 HEPACAMQ14CZ8 416 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 FAM182BQ5T319 152 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 DOK6Q6PKX4 331 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF730Q6ZMV8 503 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 GET4Q7L5D6 327 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF614Q8N883 585 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 DNAJA4Q8WW22 397 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 PEX13Q92968 403 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 LGALS12Q96DT0 336 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 RTP4Q96DX8 246 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MYRFLQ96LU7 910 aa10.09□□□□□ -0.79
CUL4A-212ENST00000617546 SMAD5Q99717 465 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 EXOSC1Q9Y3B2 195 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 OAS3Q9Y6K5 1087 aaKnown RBP10.09□□□□□ -0.79
CUL4A-212ENST00000617546 E9PAM4 449 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 H7C2Y5 167 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 CSTF2P33240 577 aaKnown RBP eCLIP10.08□□□□□ -0.85e-6■■■□□ 17.8
CUL4A-212ENST00000617546 THPOP40225 353 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 ETV4P43268 484 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 TRAM1Q15629 374 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 BTBD16Q32M84 506 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 TOMM5Q8N4H5 51 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 C2CD4AQ8NCU7 369 aaPredicted RBP10.08□□□□□ -0.8
CUL4A-212ENST00000617546 OR13J1Q8NGT2 312 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 CHPT1Q8WUD6 406 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 ZNHIT2Q9UHR6 403 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 PCDHGB7Q9Y5F8 929 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 STYXL1Q9Y6J8 313 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 KANTRA0A1W2PQU2 76 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 HOXD13P35453 343 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 MANFP55145 182 aaKnown RBP10.08□□□□□ -0.8
CUL4A-212ENST00000617546 SLC39A12Q504Y0 691 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 CGB2Q6NT52 195 aa10.08□□□□□ -0.8
CUL4A-212ENST00000617546 CAND1Q86VP6 1230 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms