RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KIR2DL1P43626 348 aaPredicted RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 BDKRB1P46663 353 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CCNG1P51959 295 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CST6Q15828 149 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 OCLNQ16625 522 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 VPS26BQ4G0F5 336 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 Q6ZSR9 355 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 FUNDC1Q8IVP5 155 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 ZNF547Q8IVP9 402 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 DSELQ8IZU8 1212 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 ASB11Q8WXH4 323 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 ULK4Q96C45 1275 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CD244Q9BZW8 370 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 NUDT4Q9NZJ9 180 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 OPTCQ9UBM4 332 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 SORCS3Q9UPU3 1222 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 FADS3Q9Y5Q0 445 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CLGNO14967 610 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 NARSO43776 548 aaKnown RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 SYNCRIPO60506 623 aaKnown RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 ZNF8P17098 575 aaPredicted RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 RPL10P27635 214 aaKnown RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 PTPN5P54829 565 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 TBL3Q12788 808 aaKnown RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 NFE2L1Q14494 772 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 PTCHD3Q3KNS1 767 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 SYTL3Q4VX76 610 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 TMEM196Q5HYL7 178 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 SLC22A15Q8IZD6 547 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 AFAP1L2Q8N4X5 818 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 DDHD1Q8NEL9 900 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CSGALNACT1Q8TDX6 532 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CXorf40AQ8TE69 158 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 VPS33AQ96AX1 596 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 MED8Q96G25 268 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 MSLNLQ96KJ4 702 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 RIPOR3Q96MK2 946 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CDRT15Q96T59 188 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 CCDC28BQ9BUN5 200 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 KLQ9UEF7 1012 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 WDFY3Q8IZQ1 3526 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 C2CD4DB7Z1M9 353 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 FBP2O00757 339 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ADAM23O75077 832 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 STK16O75716 305 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 TM7SF2O76062 418 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 WDR47O94967 919 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 MLYCDO95822 493 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 THRAP10827 490 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 EPORP19235 508 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 CASP2P42575 452 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 MNAT1P51948 309 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 TRAF3Q13114 568 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 INPP5AQ14642 412 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 TBCCQ15814 346 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 MMEL1Q495T6 779 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 AGBL4Q5VU57 503 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 C1orf146Q5VVC0 180 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ZDHHC20Q5W0Z9 365 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 NEK5Q6P3R8 708 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ADGRG6Q86SQ4 1221 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PHYKPLQ8IUZ5 450 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 CPSF7Q8N684 471 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 FNDC5Q8NAU1 212 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PDPRQ8NCN5 879 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 SMRP1Q8NCR6 262 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PHC3Q8NDX5 983 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 OR14C36Q8NHC7 312 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ACTRT2Q8TDY3 377 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ASZ1Q8WWH4 475 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 TMEM159Q96B96 161 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PPP1R16AQ96I34 528 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 INTS7Q9NVH2 962 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 ZFC3H1O60293 1989 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 ARHGEF33A8MVX0 844 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 C1QTNF3-AMACRE9PGA6 284 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 NR5A2O00482 541 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PRAMEF4O60810 478 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ANXA5P08758 320 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 HIST1H2AGP0C0S8 130 aaPredicted RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 UROSP10746 265 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 EZRP15311 586 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 HIST1H2ADP20671 130 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 INHBCP55103 352 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 DCDC1P59894 354 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 UFM1P61960 85 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 FGL2Q14314 439 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PCBP2Q15366 365 aaKnown RBP eCLIP7.61□□□□□ -1.19
NEK3-207ENST00000617054 SF1Q15637 639 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 WSCD2Q2TBF2 565 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PREPLQ4J6C6 727 aaPredicted RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 RFTN2Q52LD8 501 aaPredicted RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 PRAMEF9Q5VWM5 478 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ADNP2Q6IQ32 1131 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 TRMT11Q7Z4G4 463 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 HEATR4Q86WZ0 1026 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 SFRP1Q8N474 314 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms