RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 HECTD2Q5U5R9 776 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 UGT3A1Q6NUS8 523 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 UNC5DQ6UXZ4 953 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 ZC3HC1Q86WB0 502 aaKnown RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 PLXDC1Q8IUK5 500 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 OR52E1Q8NGJ3 308 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 CD200R1Q8TD46 325 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 SKA2Q8WVK7 121 aaPredicted RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 NRTNQ99748 197 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 MCMBPQ9BTE3 642 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 HGH1Q9BTY7 390 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 CDC42EP4Q9H3Q1 356 aaKnown RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 TFB2MQ9H5Q4 396 aaKnown RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 PDP2Q9P2J9 529 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 POLG2Q9UHN1 485 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 TRMT6Q9UJA5 497 aaKnown RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 TSR3Q9UJK0 312 aaKnown RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 TDRKHQ9Y2W6 561 aaKnown RBP16.16■□□□□ 0.18
IRF1-211ENST00000613424 NFS1Q9Y697 457 aa16.16■□□□□ 0.18
IRF1-211ENST00000613424 ASPMQ8IZT6 3477 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 TRABD2BA6NFA1 517 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 SLU7O95391 586 aaKnown RBP16.15■□□□□ 0.18
IRF1-211ENST00000613424 MATN4O95460 622 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 TPBGLP0DKB5 382 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 CAPZBP47756 277 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 SNAP47Q5SQN1 464 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 PHF19Q5T6S3 580 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 FAM45BPQ6NSW5 357 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 KLHL35Q6PF15 583 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 CYHR1Q6ZMK1 362 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 CTAGE3PQ8IX95 158 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 FAM45AQ8TCE6 357 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 LCN9Q8WX39 176 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 CCDC74BQ96LY2 380 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 FOPNLQ96NB1 174 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 CPNE1Q99829 537 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 RAB33BQ9H082 229 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 SRMSQ9H3Y6 488 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 RHOJQ9H4E5 214 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 HRASLS2Q9NWW9 162 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 EPHA6Q9UF33 1036 aa16.15■□□□□ 0.18
IRF1-211ENST00000613424 RUVBL2Q9Y230 463 aaKnown RBP16.15■□□□□ 0.18
IRF1-211ENST00000613424 OR6C74A6NCV1 312 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 OR5K3A6NET4 321 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 CAPN5O15484 640 aaPredicted RBP16.14■□□□□ 0.17
IRF1-211ENST00000613424 C1orf105O95561 183 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 C9P02748 559 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 RPN2P04844 631 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 FAM153BP0C7A2 387 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 CBSLP0DN79 551 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 THRAP10827 490 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 FDXRP22570 491 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 MCM3P25205 808 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 PHBP35232 272 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 CBSP35520 551 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 PGGT1BP53609 377 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 GFERP55789 205 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 TUBB4BP68371 445 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 TRA2AQ13595 282 aaKnown RBP eCLIP16.14■□□□□ 0.17
IRF1-211ENST00000613424 SLMAPQ14BN4 828 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 FAM153CQ494X1 144 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 PAQR3Q6TCH7 311 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 NEK10Q6ZWH5 1172 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 AMIGO1Q86WK6 493 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 CPNE9Q8IYJ1 553 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 PPM1NQ8N819 430 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 RCBTB1Q8NDN9 531 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 LIN37Q96GY3 246 aaPredicted RBP16.14■□□□□ 0.17
IRF1-211ENST00000613424 ELMO2Q96JJ3 720 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 TGM7Q96PF1 710 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 OLFM1Q99784 485 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 STRADBQ9C0K7 418 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 XKR8Q9H6D3 395 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 TXNDC16Q9P2K2 825 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 KLHL3Q9UH77 587 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 PLAGL1Q9UM63 463 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 ICKQ9UPZ9 632 aa16.14■□□□□ 0.17
IRF1-211ENST00000613424 CCDC187A0A096LP49 1063 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 FAM95CA0A1B0GW59 222 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 A0A1W2PNU3 283 aaPredicted RBP16.13■□□□□ 0.17
IRF1-211ENST00000613424 A8MU76 341 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 AGRPO00253 132 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 ACSL3O95573 720 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 MPC1LP0DKB6 136 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 ENO3P13929 434 aaPredicted RBP16.13■□□□□ 0.17
IRF1-211ENST00000613424 POLR2CP19387 275 aaPredicted RBP16.13■□□□□ 0.17
IRF1-211ENST00000613424 SAT1P21673 171 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 GP5P40197 560 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 PPP1CAP62136 330 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 ILF2Q12905 390 aaKnown RBP16.13■□□□□ 0.17
IRF1-211ENST00000613424 PDAP1Q13442 181 aaKnown RBP16.13■□□□□ 0.17
IRF1-211ENST00000613424 GRB7Q14451 532 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 C16orf72Q14CZ0 275 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 EFTUD2Q15029 972 aaKnown RBP eCLIP16.13■□□□□ 0.173e-6■■■■□ 21.3
IRF1-211ENST00000613424 GRTP1Q5TC63 336 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 IRGCQ6NXR0 463 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 ARHGAP22Q7Z5H3 698 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 OOSP2Q86WS3 158 aa16.13■□□□□ 0.17
IRF1-211ENST00000613424 DCUN1D3Q8IWE4 304 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms