RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 SLC47A1Q96FL8 570 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 EXOC2Q96KP1 924 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 ZNF300Q96RE9 604 aaPredicted RBP10.84□□□□□ -0.67
CDH4-202ENST00000611855 SLC25A51Q9H1U9 297 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 CATSPERBQ9H7T0 1116 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 ZFP14Q9HCL3 533 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 SCN3BQ9NY72 215 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 OPTCQ9UBM4 332 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 C3orf18Q9UK00 162 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 HS3ST4Q9Y661 456 aa10.84□□□□□ -0.67
CDH4-202ENST00000611855 IQCF5A8MTL0 148 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 FFAR3O14843 346 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 GPR42O15529 346 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SLC7A4O43246 635 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 AIREO43918 545 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 B3GALT4O96024 378 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 MYL3P08590 195 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SMPD1P17405 629 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 AZGP1P25311 298 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 CYP2C18P33260 490 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 BRCC3P46736 316 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 P2RX3P56373 397 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 DEFA1P59665 94 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 DEFA3P59666 94 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 TOP3AQ13472 1001 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 SLC14A2Q15849 920 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 VARS2Q5ST30 1063 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 CYP20A1Q6UW02 462 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 FAM20CQ8IXL6 584 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 GOLM1Q8NBJ4 401 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PYCR2Q96C36 320 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SEMA3CQ99985 751 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 MFSD1Q9H3U5 465 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 MRM3Q9HC36 420 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 CD274Q9NZQ7 290 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 RABL2BQ9UNT1 228 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 AGAP5A6NIR3 686 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 GABRDO14764 452 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 IRAK2O43187 625 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 TREHO43280 583 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SCO2O43819 266 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 CPNE3O75131 537 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 NIPSNAP2O75323 286 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 WISP3O95389 354 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 SLC25A27O95847 323 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 MMP2P08253 660 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 OR4Q2P0C623 313 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 DDX5P17844 614 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 EPHA2P29317 976 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 CYP4F2P78329 520 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 FOXM1Q08050 763 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 CYP4F3Q08477 520 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 CBX2Q14781 532 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 TBRG1Q3YBR2 411 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 Q6ZSR9 355 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PROSER1Q86XN7 944 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 UBE2J2Q8N2K1 259 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PGBD5Q8N414 524 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SIDT2Q8NBJ9 832 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 OR6F1Q8NGZ6 308 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PGAP3Q96FM1 320 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 IMP4Q96G21 291 aaKnown RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 NEDD4LQ96PU5 975 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 BTBD2Q9BX70 525 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 TOR4AQ9NXH8 423 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 EHD3Q9NZN3 535 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 MAGEL2Q9UJ55 1249 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 VPS4AQ9UN37 437 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PCDHB14Q9Y5E9 798 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 ZNF236Q9UL36 1845 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 FAM92AA1XBS5 289 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 ISPDA4D126 451 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 F8W810 466 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 OR1I1O60431 355 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 PAPSS2O95340 614 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 CAPN1P07384 714 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 HTR2BP41595 481 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 GABARAPL2P60520 117 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 NFKB2Q00653 900 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 BCL7AQ4VC05 210 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 RFTN2Q52LD8 501 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 SMYD5Q6GMV2 418 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SCN4BQ8IWT1 228 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 METTL6Q8TCB7 284 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 SLC16A10Q8TF71 515 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 ZNF583Q96ND8 569 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 ZNF717Q9BY31 904 aaPredicted RBP10.83□□□□□ -0.68
CDH4-202ENST00000611855 BTBD3Q9Y2F9 522 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 TPRKBQ9Y3C4 175 aa10.83□□□□□ -0.68
CDH4-202ENST00000611855 MMP3P08254 477 aa10.82□□□□□ -0.68
CDH4-202ENST00000611855 HSMCR30P0CW71 290 aa10.82□□□□□ -0.68
CDH4-202ENST00000611855 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
CDH4-202ENST00000611855 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
CDH4-202ENST00000611855 GRK3P35626 688 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms