RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 EPHB3P54753 998 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 DAG1Q14118 895 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 SMU1Q2TAY7 513 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 SPANXN4Q5MJ08 99 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 GPR180Q86V85 440 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ZSWIM9Q86XI8 627 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 RGL4Q8IZJ4 473 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 MTFMTQ96DP5 389 aaKnown RBP16.87■□□□□ 0.29
NEK3-206ENST00000611833 TMEM169Q96HH4 297 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 CCDC115Q96NT0 180 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 MUS81Q96NY9 551 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ATP13A3Q9H7F0 1226 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 GORASP2Q9H8Y8 452 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 TRPS1Q9UHF7 1281 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ZNHIT2Q9UHR6 403 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ADGRE2Q9UHX3 823 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 NEUROG3Q9Y4Z2 214 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ZNF701M0R085 212 aaPredicted RBP16.87■□□□□ 0.29
NEK3-206ENST00000611833 UPK1AO00322 258 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 MANBAO00462 879 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ZNF821O75541 412 aaPredicted RBP16.87■□□□□ 0.29
NEK3-206ENST00000611833 PGRP06401 933 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 TTKP33981 857 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 GPR33Q49SQ1 333 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 MBOAT1Q6ZNC8 495 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 KCTD8Q6ZWB6 473 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 TRIM46Q7Z4K8 759 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ZDHHC13Q8IUH4 622 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 SLC39A11Q8N1S5 342 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 NXPE1Q8N323 547 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 KRTCAP2Q8N6L1 136 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ACDQ96AP0 544 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 SH3GL1Q99961 368 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 TBCDQ9BTW9 1192 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 NTMT1Q9BV86 223 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 ING2Q9H160 280 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 KLHL33A6NCF5 533 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 SOCS5O75159 536 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 STK16O75716 305 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 THRBP10828 461 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 EEF1B2P24534 225 aaKnown RBP16.86■□□□□ 0.29
NEK3-206ENST00000611833 SEMG2Q02383 582 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 ENPP6Q6UWR7 440 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 TSPAN33Q86UF1 283 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 TCEAL8Q8IYN2 117 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 CLHC1Q8NHS4 586 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 FAM162AQ96A26 154 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 OR52E6Q96RD3 313 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 DCUN1D5Q9BTE7 237 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 IFT80Q9P2H3 777 aaPredicted RBP16.86■□□□□ 0.29
NEK3-206ENST00000611833 INVSQ9Y283 1065 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 MAGED1Q9Y5V3 778 aaPredicted RBP16.86■□□□□ 0.29
NEK3-206ENST00000611833 ELOVL7A1L3X0 281 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 G3V2T6 193 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 GNGT2O14610 69 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 PRSS23O95084 383 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 IGSF6O95976 241 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 GGT5P36269 586 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 CYP4F8P98187 520 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 LMAN2Q12907 356 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 RAB39AQ14964 217 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 NEDD8Q15843 81 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 GPR107Q5VW38 600 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 CHST15Q7LFX5 561 aaPredicted RBP16.86■□□□□ 0.29
NEK3-206ENST00000611833 GALNT13Q8IUC8 556 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 ADGRG2Q8IZP9 1017 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 FAM86B1Q8N7N1 296 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 UBTD2Q8WUN7 234 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 C19orf43Q9BQ61 176 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 RDH14Q9HBH5 336 aa16.86■□□□□ 0.29
NEK3-206ENST00000611833 LSM7Q9UK45 103 aaKnown RBP16.86■□□□□ 0.29
NEK3-206ENST00000611833 PIKFYVEQ9Y2I7 2098 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 LAMA2P24043 3122 aaKnown RBP16.85■□□□□ 0.29
NEK3-206ENST00000611833 CLDN9O95484 217 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 CST1P01037 141 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 ALPLP05186 524 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 ANXA5P08758 320 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 TCF3P15923 654 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 SERPINA4P29622 427 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 HLCSP50747 726 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 CTBSQ01459 385 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 CPSF6Q16630 551 aaKnown RBP eCLIP16.85■□□□□ 0.29
NEK3-206ENST00000611833 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 DGKKQ5KSL6 1271 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 FAM117BQ6P1L5 589 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 METTL2BQ6P1Q9 378 aaKnown RBP16.85■□□□□ 0.29
NEK3-206ENST00000611833 TPGS1Q6ZTW0 290 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 NECAB2Q7Z6G3 386 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 ITIH5Q86UX2 942 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 BBS7Q8IWZ6 715 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 ZNF548Q8NEK5 533 aaPredicted RBP16.85■□□□□ 0.29
NEK3-206ENST00000611833 FAM81AQ8TBF8 368 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 SLC22A17Q8WUG5 538 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 GFM2Q969S9 779 aaKnown RBP16.85■□□□□ 0.29
NEK3-206ENST00000611833 VOPP1Q96AW1 172 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 SLC47A1Q96FL8 570 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 ASIC4Q96FT7 647 aa16.85■□□□□ 0.29
NEK3-206ENST00000611833 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms