RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 A0A1B0GTH6 734 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 A0A1W2PQJ5 194 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 ZSCAN9O15535 394 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 TSFMP43897 325 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 ZNF169Q14929 603 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 ZNF385CQ66K41 422 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 PID1Q7Z2X4 250 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 ZC3H18Q86VM9 953 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 C19orf47Q8N9M1 422 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 OR52E1Q8NGJ3 308 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 NAT14Q8WUY8 206 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 HEXDCQ8WVB3 486 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 ULK4Q96C45 1275 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 TFB2MQ9H5Q4 396 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 CDC23Q9UJX2 597 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 CDYLQ9Y232 598 aa16.77■□□□□ 0.28
CHMP4A-211ENST00000609024 SRP72O76094 671 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 ALAS2P22557 587 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 GRNP28799 593 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 NR2C2P49116 596 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 PRKG2Q13237 762 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 MPP3Q13368 585 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 TLR1Q15399 786 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 DEFB110Q30KQ9 67 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 NKAIN1Q4KMZ8 207 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 PRAMEF13Q5VWM6 474 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 B3GNTL1Q67FW5 361 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 TLDC1Q6P9B6 456 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 SPESP1Q6UW49 350 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 KDELC1Q6UW63 502 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 PPP1R32Q7Z5V6 425 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 PARP9Q8IXQ6 854 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 ZNF655Q8N720 491 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 PHC3Q8NDX5 983 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 NACC2Q96BF6 587 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 RNF25Q96BH1 459 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 HGH1Q9BTY7 390 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 SPRTNQ9H040 489 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 XKR8Q9H6D3 395 aa16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 DHCR7Q9UBM7 475 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 SUCOQ9UBS9 1254 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-211ENST00000609024 C17orf113A0A1B0GUU1 675 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 MASP2O00187 686 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 PIM1P11309 404 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 TNNT1P13805 278 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 CD151P48509 253 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 PRLHRP49683 370 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 ZBED6P86452 979 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 GDF7Q7Z4P5 450 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 LILRA3Q8N6C8 439 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 OR4K2Q8NGD2 314 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 DENND1AQ8TEH3 1009 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 MRGPRX2Q96LB1 330 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 MAGEB10Q96LZ2 347 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 FCRL5Q96RD9 977 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 VAT1Q99536 393 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 COPS8Q99627 209 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 COG4Q9H9E3 785 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 OLAHQ9NV23 265 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 RSPH14Q9UHP6 348 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 FBXL4Q9UKA2 621 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 LUC7L2Q9Y383 392 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 ARL5AQ9Y689 179 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 PCSK5Q92824 1860 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 CSMD1Q96PZ7 3565 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 SEC16AO15027 2179 aa16.75■□□□□ 0.27
CHMP4A-211ENST00000609024 MDC1Q14676 2089 aaKnown RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 POLEQ07864 2286 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 GAPDHSO14556 408 aaPredicted RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 ATP1B2P14415 290 aaPredicted RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 ITGALP20701 1170 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 CD68P34810 354 aaPredicted RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 SHMT2P34897 504 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 TPM4P67936 248 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 TFDP2Q14188 446 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 PTPRCAPQ14761 206 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 NR1I3Q14994 352 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 PRKD1Q15139 912 aaPredicted RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 TAF1AQ15573 450 aaPredicted RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 BCORP1Q8N888 145 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 DLG3Q92796 817 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 GBP4Q96PP9 640 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 SLC6A20Q9NP91 592 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 DDX56Q9NY93 547 aaKnown RBP16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 FKBPLQ9UIM3 349 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 CSAG2Q9Y5P2 127 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 C2CD3Q4AC94 2353 aa16.74■□□□□ 0.27
CHMP4A-211ENST00000609024 FBN2P35556 2912 aa16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 C5orf60A6NFR6 353 aa16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 KDM1AO60341 852 aa16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 JRKO75564 520 aa16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 STSP08842 583 aa16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 MMP11P24347 488 aa16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 MRPL14Q6P1L8 145 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-211ENST00000609024 TRIM73Q86UV7 250 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms