RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 NCF1BA6NI72 391 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 NCF1CA8MVU1 366 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 ARHGEF33A8MVX0 844 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 TOR1BO14657 336 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 HGSO14964 777 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 TAPBPO15533 448 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PSIP1O75475 530 aaKnown RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 SIX3O95343 332 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 SP9P0CG40 484 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 NCF1P14598 390 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 ATP5F1P24539 256 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 HTR1BP28222 390 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CTBSQ01459 385 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 CLCA4Q14CN2 919 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 TGFBIQ15582 683 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 SYTL3Q4VX76 610 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 GPSM1Q86YR5 675 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 SFTPA2Q8IWL1 248 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 LMNTD1Q8N9Z9 388 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PHC3Q8NDX5 983 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 RDH11Q8TC12 318 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 GRAMD1AQ96CP6 724 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 TMEM237Q96Q45 408 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 SLC12A9Q9BXP2 914 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 WWP1Q9H0M0 922 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 PRDM8Q9NQV8 689 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 DGKBQ9Y6T7 804 aa11.29□□□□□ -0.6
CTCFL-221ENST00000608903 FANCMQ8IYD8 2048 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 SUPT3HB4E1H0 165 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 F8W8V4 182 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 H3BM21 787 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 TLR4O00206 839 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 SUPT3HO75486 399 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 LYPLA1O75608 230 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 RASGRP1O95267 797 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 GSTM1P09488 218 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 TPBGLP0DKB5 382 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 KELP23276 732 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 BDKRB1P46663 353 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 PRKAA2P54646 552 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 BNC1Q01954 994 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 GSTM4Q03013 218 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 BST1Q10588 318 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 OVGP1Q12889 678 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 UNC50Q53HI1 259 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 CAPRIN2Q6IMN6 1127 aaKnown RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 UBE2R2Q712K3 238 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 RGL4Q8IZJ4 473 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 PTGR2Q8N8N7 351 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 SKA2Q8WVK7 121 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 INSM2Q96T92 566 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 NCKIPSDQ9NZQ3 722 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
CTCFL-221ENST00000608903 CFAP20Q9Y6A4 193 aaKnown RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 TP53BP1Q12888 1972 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-221ENST00000608903 TRIM13O60858 407 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 GUCA1CO95843 209 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.6
CTCFL-221ENST00000608903 CLCNKAP51800 687 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.6
CTCFL-221ENST00000608903 NAGLUP54802 743 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 GRB7Q14451 532 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 ANGPT1Q15389 498 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 DUS1LQ6P1R4 473 aaKnown RBP11.27□□□□□ -0.6
CTCFL-221ENST00000608903 ADAMTSL2Q86TH1 951 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 LSMEM2Q8N112 164 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 C10orf82Q8WW14 230 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 DPEP2Q9H4A9 486 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 TBC1D29Q9UFV1 150 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 DNAH14Q0VDD8 3507 aa11.27□□□□□ -0.6
CTCFL-221ENST00000608903 PPP6CO00743 305 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 BCAT2O15382 392 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-221ENST00000608903 FFAR2O15552 330 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 SNNO75324 88 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-221ENST00000608903 IPO13O94829 963 aaKnown RBP11.27□□□□□ -0.61
CTCFL-221ENST00000608903 C1orf105O95561 183 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 NXPH1P58417 271 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 DNAJB13P59910 316 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 ELF3P78545 371 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-221ENST00000608903 NFKB2Q00653 900 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 RPA4Q13156 261 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 LIPMQ5VYY2 423 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 PDZD3Q86UT5 571 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 IQCHQ86VS3 1027 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 ZBTB44Q8NCP5 570 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 RFWD2Q8NHY2 731 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 RHBDF1Q96CC6 855 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 NSUN5Q96P11 429 aaKnown RBP11.27□□□□□ -0.61
CTCFL-221ENST00000608903 SORT1Q99523 831 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 TMEM79Q9BSE2 394 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-221ENST00000608903 OSGEPL1Q9H4B0 414 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 PARVBQ9HBI1 364 aa11.27□□□□□ -0.61
CTCFL-221ENST00000608903 NPHS2Q9NP85 383 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms