RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RETSATQ6NUM9 610 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 SCARA5Q6ZMJ2 495 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 VWA5B2Q8N398 1253 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ITFG1Q8TB96 612 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 KLHL6Q8WZ60 621 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 USP7Q93009 1102 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 UBE2FQ969M7 185 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ISL2Q96A47 359 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 LINC00052Q96N35 136 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 RIBC2Q9H4K1 309 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 RANBP3Q9H6Z4 567 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PTPRHQ9HD43 1115 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 MCUBQ9NWR8 336 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 RDH8Q9NYR8 311 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ARHGAP28Q9P2N2 729 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 C3orf18Q9UK00 162 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 MAFFQ9ULX9 164 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 AUP1Q9Y679 476 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 UBXN8O00124 270 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 KATNA1O75449 491 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 TNNC2P02585 160 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 C4BPAP04003 597 aaKnown RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 CYP11A1P05108 521 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 CD19P15391 556 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 NRIP1P48552 1158 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 CHRNB3Q05901 458 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 IL18R1Q13478 541 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 FAM83EQ2M2I3 478 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 RNF135Q8IUD6 432 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 SLC41A1Q8IVJ1 513 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 CYP4Z2PQ8N1L4 340 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 KCTD17Q8N5Z5 321 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 OR8K5Q8NH50 307 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 WDR48Q8TAF3 677 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 GPR151Q8TDV0 419 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 SLC5A11Q8WWX8 675 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 PHF21BQ96EK2 531 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 GTPBP2Q9BX10 602 aaKnown RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 AMNQ9BXJ7 453 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 PITHD1Q9GZP4 211 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 SLAMF7Q9NQ25 335 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 ABCB8Q9NUT2 735 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 DCAF16Q9NXF7 216 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 KLHL21Q9UJP4 597 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 ELF5Q9UKW6 265 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 PRELID3BQ9Y3B1 194 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 LRRC72A6NJI9 287 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 BBIP1A8MTZ0 92 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 GMDSO60547 372 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 PRSS23O95084 383 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 CFBP00751 764 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 AHSGP02765 367 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 ALPPP05187 535 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 SDC4P31431 198 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 RARRES1P49788 294 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 KCNK10P57789 538 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 PCDH1Q08174 1060 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 QPRTQ15274 297 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 RPS6KA2Q15349 733 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 TUSC1Q2TAM9 212 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 NIPA1Q7RTP0 329 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 TMEM179BQ7Z7N9 219 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 CENPLQ8N0S6 344 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 COLGALT1Q8NBJ5 622 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 TMEM161BQ8NDZ6 487 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 KBTBD8Q8NFY9 601 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 REPS1Q96D71 796 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 RBM4BQ9BQ04 359 aaKnown RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 RBM4Q9BWF3 364 aaKnown RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 FAM126AQ9BYI3 521 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 LRRC4Q9HBW1 653 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 HPF1Q9NWY4 346 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 ALG5Q9Y673 324 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
CTCFL-218ENST00000608440 SSC5DA1L4H1 1573 aa12.34□□□□□ -0.43
CTCFL-218ENST00000608440 ADM5C9JUS6 153 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 E9PAM4 449 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 F8W036 122 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 M0R082 166 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 SSX5O60225 188 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 WDR47O94967 919 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 HPRP00739 348 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 PLATP00750 562 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-218ENST00000608440 ITGB3P05106 788 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 MAPTP10636 758 aaKnown RBP12.33□□□□□ -0.44
CTCFL-218ENST00000608440 SOX6P35712 828 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 KIR2DL3P43628 341 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 GBX2P52951 348 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-218ENST00000608440 MRPL28Q13084 256 aaKnown RBP12.33□□□□□ -0.44
CTCFL-218ENST00000608440 FGFBP1Q14512 234 aa12.33□□□□□ -0.44
CTCFL-218ENST00000608440 TIGD6Q17RP2 521 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms