RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 CD27P26842 260 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 PSMC4P43686 418 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 NKX2-1P43699 371 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 KCNJ4P48050 445 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 GLIPR1P48060 266 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 RAD23AP54725 363 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 MLLT10P55197 1068 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 POLR2LP62875 67 aaKnown RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 LGALS3BPQ08380 585 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 ACSM1Q08AH1 577 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 ZNF415Q09FC8 603 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 KRT33BQ14525 404 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 NR1D2Q14995 579 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 P2RY6Q15077 328 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 CA9Q16790 459 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 TMEM266Q2M3C6 531 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 LETM2Q2VYF4 491 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 SYT14P1Q58G82 188 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 MDH1BQ5I0G3 518 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 KRBOX4Q5JUW0 171 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 DCAF10Q5QP82 559 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 STPG1Q5TH74 334 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 IRAK1BP1Q5VVH5 260 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 SUSD4Q5VX71 490 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 PRR27Q6MZM9 219 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 FAM53AQ6NSI3 398 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 CORO6Q6QEF8 472 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 NUP54Q7Z3B4 507 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 TRPT1Q86TN4 253 aaKnown RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 EXOC3L1Q86VI1 746 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 NR2C2APQ86WQ0 139 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 TMEM173Q86WV6 379 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 APLFQ8IW19 511 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 KLHDC8BQ8IXV7 354 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 TMTC2Q8N394 836 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 ANKRD13CQ8N6S4 541 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 MAB21L3Q8N8X9 362 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 KCNH5Q8NCM2 988 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 OR6J1Q8NGC5 347 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 OR11H4Q8NGC9 324 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 IRGQQ8WZA9 623 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 DHX58Q96C10 678 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 RADILQ96JH8 1075 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 SGK494Q96LW2 274 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 FER1L6-AS2Q96M78 137 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 LMF2Q9BU23 707 aaKnown RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 FNDC11Q9BVV2 318 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 LAT2Q9GZY6 243 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 SHARPINQ9H0F6 387 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 FZD8Q9H461 694 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 OPA3Q9H6K4 179 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 NOL11Q9H8H0 719 aaKnown RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 Q9H8V8 135 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 FKRPQ9H9S5 495 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 TCF7L2Q9NQB0 619 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 CCDC177Q9NQR7 707 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 SDR39U1Q9NRG7 319 aaPredicted RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 SLC38A7Q9NVC3 462 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 CHCHD3Q9NX63 227 aaKnown RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 ABT1Q9ULW3 272 aaKnown RBP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 NME7Q9Y5B8 376 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.49□□□□□ -2.17
SNORA28-201ENST00000606769 LIPGQ9Y5X9 500 aa1.49□□□□□ -2.17
SNORA28-201ENST00000606769 TCF20Q9UGU0 1960 aaKnown RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 DISP3Q9P2K9 1392 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 IGLV9-49A0A0B4J1Y8 123 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 EDDM13A0A1B0GTR0 161 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 NEMP2A6NFY4 417 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 OR6C76A6NM76 312 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 C15orf62A8K5M9 175 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 H7C0S8 307 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 GAPDHSO14556 408 aaPredicted RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 DKC1O60832 514 aaKnown RBP eCLIP1.48□□□□□ -2.17not detected■■■■■ 46.3
SNORA28-201ENST00000606769 DIAPH2O60879 1101 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 ACSL3O95573 720 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 PAK4O96013 591 aaPredicted RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 NGFP01138 241 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 IGHV2-70P01814 119 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 ATP5BP06576 529 aaKnown RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 GPIP06744 558 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 H1F0P07305 194 aaKnown RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 CSN3P07498 182 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 SP1P08047 785 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 RAB40ALP0C0E4 278 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 HAPLN1P10915 354 aaPredicted RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 CETPP11597 493 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 VPREB1P12018 145 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 PFKFB1P16118 471 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 ACHEP22303 614 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 CA4P22748 312 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 PTGER4P35408 488 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 CAPZA2P47755 286 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 NR2C2P49116 596 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 HOXA1P49639 335 aaPredicted RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 GMPSP49915 693 aaPredicted RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 ZNF41P51814 821 aaPredicted RBP1.48□□□□□ -2.17
SNORA28-201ENST00000606769 LIMK1P53667 647 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 MAPK12P53778 367 aa1.48□□□□□ -2.17
SNORA28-201ENST00000606769 UBASH3AP57075 661 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms