RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HSFY1Q96LI6 401 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 C1orf74Q96LT6 269 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MAGEB10Q96LZ2 347 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MUS81Q96NY9 551 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 NODALQ96S42 347 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMEM209Q96SK2 561 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 IL12RB2Q99665 862 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CPNE1Q99829 537 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 APOL4Q9BPW4 351 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAM118BQ9BPY3 351 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 LXNQ9BS40 222 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF747Q9BV97 191 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ACAT2Q9BWD1 397 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 GTPBP2Q9BX10 602 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 UGT2B28Q9BY64 529 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 WDR11Q9BZH6 1224 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PCDHAC1Q9H158 963 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 LHX5Q9H2C1 402 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SYNDIG1Q9H7V2 258 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SCPEP1Q9HB40 452 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 XPNPEP3Q9NQH7 507 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRDM8Q9NQV8 689 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 EIF2B3Q9NR50 452 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 AASDHPPTQ9NRN7 309 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC39A1Q9NY26 324 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 RBAKQ9NYW8 714 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 IL37Q9NZH6 218 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 OPTCQ9UBM4 332 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLCO3A1Q9UIG8 710 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRMT6Q9UJA5 497 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MOSPD1Q9UJG1 213 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ERVW-1Q9UQF0 538 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PDE10AQ9Y233 779 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 POLHQ9Y253 713 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNX5Q9Y5X3 404 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PEX16Q9Y5Y5 336 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 KCNE2Q9Y6J6 123 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNED1Q8TER0 1413 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 IGLV3-22A0A075B6J6 115 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 A0A075B6Q4 140 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARPC4-TTLL3A0A0A6YYG9 625 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 A0A0X1KG70 313 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TUBAL3A6NHL2 446 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC154A6NI56 674 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 A6NL46 340 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 KCNU1A8MYU2 1149 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNAP23O00161 211 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 UPK1AO00322 258 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EEF2KO00418 725 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EI24O14681 340 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TPP1O14773 563 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NRP1O14786 923 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SULT1B1O43704 296 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF623O75123 536 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF780AO75290 641 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TULP3O75386 442 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF254O75437 659 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PIAS1O75925 651 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNAPC5O75971 98 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SRP72O76094 671 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 OR7A10O76100 309 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EPN2O95208 641 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNAP29O95721 258 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TSPAN12O95859 305 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRUB2O95900 331 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 F9P00740 461 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRLP01236 227 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 C1QBP02746 253 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 FTH1P02794 183 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ALPLP05186 524 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CAPN1P07384 714 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ASNSP08243 561 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 THRBP10828 461 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CD1EP15812 388 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPNP16150 400 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 IL1RNP18510 177 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ATF6P18850 670 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EFNA1P20827 205 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EEF1B2P24534 225 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 HTR1EP28566 365 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 CD6P30203 668 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 HIBADHP31937 336 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 SHMT1P34896 483 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 HTR7P34969 479 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GGT5P36269 586 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ACVRL1P37023 503 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARL1P40616 181 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 IL12RB1P42701 662 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 GYG1P46976 350 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRELPP51888 382 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 NKX2-5P52952 324 aaPredicted RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARSFP54793 590 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 RAB25P57735 213 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EVA1CP58658 441 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 RPL7AP62424 266 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 OLR1P78380 273 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 MRPS15P82914 257 aaKnown RBP4□□□□□ -1.77
HMGB1P50-201ENST00000605814 RBP5P82980 135 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 OGDHQ02218 1023 aa4□□□□□ -1.77
HMGB1P50-201ENST00000605814 EMX1Q04741 257 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms