RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 OR5K3A6NET4 321 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TLCD2A6NGC4 264 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 K7ENP7 123 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 MATN2O00339 956 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CES2O00748 559 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 LIN7AO14910 233 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 POLR1CO15160 346 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 OR1I1O60431 355 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 RAD1O60671 282 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PRB1P04280 392 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TCP1P17987 556 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ITGB6P18564 788 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PAMP19021 973 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 NMBRP28336 390 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PDHA2P29803 388 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 COILP38432 576 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ARCN1P48444 511 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CD151P48509 253 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 NPY2RP49146 381 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 FNTAP49354 379 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TTPAP49638 278 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CSE1LP55060 971 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PPP1CAP62136 330 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 MC2RQ01718 297 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 RHDQ02161 417 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 RPA4Q13156 261 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TUBB3Q13509 450 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 KCNJ11Q14654 390 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TMED2Q15363 201 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PPP1R7Q15435 360 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CYP1B1Q16678 543 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TAF1BQ53T94 588 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PTRHD1Q6GMV3 140 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CAPRIN2Q6IMN6 1127 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TTC27Q6P3X3 843 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 LRRC8BQ6P9F7 803 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 INO80CQ6PI98 192 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ZNF534Q76KX8 674 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 LDB1Q86U70 411 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 RASGRP3Q8IV61 690 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CACNA2D3Q8IZS8 1091 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 MPP5Q8N3R9 675 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ZSCAN1Q8NBB4 408 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 SIDT2Q8NBJ9 832 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 GSDMBQ8TAX9 411 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ACTRT1Q8TDG2 376 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 COG1Q8WTW3 980 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ZFPM2Q8WW38 1151 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 LCN9Q8WX39 176 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 UBXN4Q92575 508 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 KIAA1143Q96AT1 154 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ELMO2Q96JJ3 720 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 OR6C1Q96RD1 312 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ULBP3Q9BZM4 244 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 RAB33BQ9H082 229 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 OR52A5Q9H2C5 316 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 TRIT1Q9H3H1 467 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 SRMSQ9H3Y6 488 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CLMPQ9H6B4 373 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 MVB12BQ9H7P6 319 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ZNF395Q9H8N7 513 aaPredicted RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 MRM3Q9HC36 420 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 FBXO8Q9NRD0 319 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 CHRAC1Q9NRG0 131 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 HRASLS2Q9NWW9 162 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 SOHLH2Q9NX45 425 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 SYBUQ9NX95 663 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 SIDT1Q9NXL6 827 aaKnown RBP5.7□□□□□ -1.5
FOCAD-213ENST00000604254 EPHA6Q9UF33 1036 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ASIC3Q9UHC3 531 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 GNPTGQ9UJJ9 305 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ASF1AQ9Y294 204 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 PRSS21Q9Y6M0 314 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 AHCTF1Q8WYP5 2266 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 ATMQ13315 3056 aa5.7□□□□□ -1.5
FOCAD-213ENST00000604254 IGHV5-51A0A0C4DH38 117 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 TCRBV7S3A2A0A539 114 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 USP27XA6NNY8 438 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 C2orf74A8MZ97 194 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 GOLGA8MH3BSY2 632 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 PRMT5O14744 637 aaPredicted RBP5.69□□□□□ -1.5
FOCAD-213ENST00000604254 PFDN6O15212 129 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 ZNF185O15231 689 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 CD3EAPO15446 510 aaKnown RBP5.69□□□□□ -1.5
FOCAD-213ENST00000604254 KIF1CO43896 1103 aaKnown RBP5.69□□□□□ -1.5
FOCAD-213ENST00000604254 KDM1AO60341 852 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 NDUFS3O75489 264 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 STK17BO94768 372 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 TMEM63AO94886 807 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 VAPBO95292 243 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 NTRK1P04629 796 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 RPN2P04844 631 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 APOA4P06727 396 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 EBLN1P0CF75 366 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 LIFP15018 202 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 NELFEP18615 380 aaKnown RBP5.69□□□□□ -1.5
FOCAD-213ENST00000604254 POLR2CP19387 275 aaPredicted RBP5.69□□□□□ -1.5
FOCAD-213ENST00000604254 CDH3P22223 829 aa5.69□□□□□ -1.5
FOCAD-213ENST00000604254 SHMT2P34897 504 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms