RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CEACAM5P06731 702 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 HNRNPA2B1P22626 353 aaKnown RBP16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 SYTL3Q4VX76 610 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 IRGCQ6NXR0 463 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 RIPOR1Q6ZS17 1223 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 STAG3L4Q8TBR4 150 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 CLPTM1LQ96KA5 538 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 SHCBP1LQ9BZQ2 653 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 KLHL42Q9P2K6 505 aa16.97■□□□□ 0.31
PPFIA3-207ENST00000602716 IPO13O94829 963 aaKnown RBP16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 LINGO3P0C6S8 592 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 CPOXP36551 454 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 AGTR2P50052 363 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 PRKAA2P54646 552 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 ACTR3P61158 418 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 SIGLEC14Q08ET2 396 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 TGFBIQ15582 683 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 PFKFB4Q16877 469 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 PLEKHS1Q5SXH7 462 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 TSSK4Q6SA08 328 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 MYLK4Q86YV6 388 aaPredicted RBP16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 CCNYL1Q8N7R7 359 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 TMEM145Q8NBT3 493 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 SKA2Q8WVK7 121 aaPredicted RBP16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 ESAMQ96AP7 390 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 PDXPQ96GD0 296 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 ORAI3Q9BRQ5 295 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 THTPAQ9BU02 230 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 EPHX3Q9H6B9 360 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 COG4Q9H9E3 785 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 SLC7A8Q9UHI5 535 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 PLEKHM1Q9Y4G2 1056 aa16.96■□□□□ 0.31
PPFIA3-207ENST00000602716 QSOX1O00391 747 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 SLCO2B1O94956 709 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 GRK2P25098 689 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 ZRSR2Q15696 482 aaKnown RBP16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 MAVSQ7Z434 540 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 GPSM1Q86YR5 675 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 LSMEM2Q8N112 164 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 DENND6BQ8NEG7 585 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 SNX19Q92543 992 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 NSUN5Q96P11 429 aaKnown RBP16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 ANGPTL2Q9UKU9 493 aa16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.96■□□□□ 0.3
PPFIA3-207ENST00000602716 DPPA5A6NC42 116 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 CBSLP0DN79 551 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 GFAPP14136 432 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 ALOX15P16050 662 aaPredicted RBP16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 TSPAN8P19075 237 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 CBSP35520 551 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 PFN3P60673 137 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 NFKB2Q00653 900 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 TCEA2Q15560 299 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 C6orf163Q5TEZ5 329 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 ADAMTSL2Q86TH1 951 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 PPFIBP2Q8ND30 876 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 GLMNQ92990 594 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 LINC00615Q96LM1 132 aaPredicted RBP16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 TNFRSF12AQ9NP84 129 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 DNAJC28Q9NX36 388 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 CIDEBQ9UHD4 219 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 APOBEC2Q9Y235 224 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 SLC17A4Q9Y2C5 497 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 USP34Q70CQ2 3546 aa16.95■□□□□ 0.3
PPFIA3-207ENST00000602716 FPGTO14772 594 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 MAP3K7O43318 606 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 GRID2O43424 1007 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ZNF217O75362 1048 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 GUCA1CO95843 209 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ENO3P13929 434 aaPredicted RBP16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 BCKDHBP21953 392 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 MPSTP25325 297 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 CXCL12P48061 93 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 CCR5P51681 352 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ABCE1P61221 599 aaKnown RBP16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 MXRA7P84157 204 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 UNC50Q53HI1 259 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 LAYNQ6UX15 382 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 LRRTM4Q86VH4 590 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 CFAP206Q8IYR0 622 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 FBXO39Q8N4B4 442 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 AGR3Q8TD06 166 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ASZ1Q8WWH4 475 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 OR1E3Q8WZA6 343 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 TMEM159Q96B96 161 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 GSTO2Q9H4Y5 243 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 GPR34Q9UPC5 381 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ST14Q9Y5Y6 855 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 TECTAO75443 2155 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 A0A088AWK7 358 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 MEI4A8MW99 385 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 KLK8O60259 260 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 SMIM24O75264 130 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ACP5P13686 325 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ANPEPP15144 967 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 BDKRB1P46663 353 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 IDH3AP50213 366 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 DNAJB13P59910 316 aa16.94■□□□□ 0.3
PPFIA3-207ENST00000602716 ABRQ12979 859 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms