RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SYCE1Q8N0S2 351 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 ENDOVQ8N8Q3 282 aaKnown RBP16.47■□□□□ 0.23
SCAF1-204ENST00000601038 SLC35B2Q8TB61 432 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 ALS2CR12Q96Q35 445 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 TMEM121Q9BTD3 319 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 HGH1Q9BTY7 390 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 ACTR5Q9H9F9 607 aaPredicted RBP16.47■□□□□ 0.23
SCAF1-204ENST00000601038 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 ACTR10Q9NZ32 417 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 SMARCAL1Q9NZC9 954 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 TCFL5Q9UL49 500 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 SNX7Q9UNH6 387 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 MED13Q9UHV7 2174 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 ARGFXA6NJG6 315 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 QSOX1O00391 747 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 CAPN1P07384 714 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 NSG1P42857 185 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 LMAN1P49257 510 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 CCL11P51671 97 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 PGDP52209 483 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 GDF10P55107 478 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 CHAF1BQ13112 559 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 ITIH4Q14624 930 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 PAPD7Q5XG87 772 aaKnown RBP16.46■□□□□ 0.23
SCAF1-204ENST00000601038 LINC00523Q86TU6 105 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 SYTL1Q8IYJ3 562 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 FAM26EQ8N5C1 309 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 DPH2Q9BQC3 489 aaPredicted RBP16.46■□□□□ 0.23
SCAF1-204ENST00000601038 XKR8Q9H6D3 395 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.23
SCAF1-204ENST00000601038 R3HDM2Q9Y2K5 976 aaKnown RBP16.46■□□□□ 0.23
SCAF1-204ENST00000601038 PRSS21Q9Y6M0 314 aa16.46■□□□□ 0.23
SCAF1-204ENST00000601038 PTPN13Q12923 2485 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 E7EQ34 232 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 HBQ1P09105 142 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 PVRP15151 417 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 ACADLP28330 430 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 PTGIRP43119 386 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 ITGA1P56199 1179 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 SPESP1Q6UW49 350 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 PACS1Q6VY07 963 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 CDHR3Q6ZTQ4 885 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 BAG1Q99933 345 aaPredicted RBP16.45■□□□□ 0.22
SCAF1-204ENST00000601038 SLC7A5P2Q9GIP4 190 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 KLHL25Q9H0H3 589 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 PIH1D1Q9NWS0 290 aaKnown RBP16.45■□□□□ 0.22
SCAF1-204ENST00000601038 ICKQ9UPZ9 632 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 ASF1AQ9Y294 204 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 PCDHGB7Q9Y5F8 929 aa16.45■□□□□ 0.22
SCAF1-204ENST00000601038 TNRC6AQ8NDV7 1962 aaKnown RBP16.44■□□□□ 0.22
SCAF1-204ENST00000601038 TCRBV7S2A1N4TA0A589 114 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 TTLL8A6PVC2 850 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 ERI2A8K979 691 aaKnown RBP16.44■□□□□ 0.22
SCAF1-204ENST00000601038 ZNF749O43361 778 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 CEACAM4O75871 244 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 TMEM63AO94886 807 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 FTCDO95954 541 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 FTH1P02794 183 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 AGXTP21549 392 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 MSNP26038 577 aaKnown RBP16.44■□□□□ 0.22
SCAF1-204ENST00000601038 STIP1P31948 543 aaKnown RBP16.44■□□□□ 0.22
SCAF1-204ENST00000601038 FOXN2P32314 431 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 SHMT2P34897 504 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 PLOD1Q02809 727 aaPredicted RBP16.44■□□□□ 0.22
SCAF1-204ENST00000601038 KIF5AQ12840 1032 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 PTCHD3Q3KNS1 767 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 FAM198BQ6UWH4 519 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 UNC5AQ6ZN44 842 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 HOOK3Q86VS8 718 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 TBC1D21Q8IYX1 336 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 GPR135Q8IZ08 494 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 OR5AR1Q8NGP9 310 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 ELMO1Q92556 727 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.44■□□□□ 0.224e-7■■□□□ 11.8
SCAF1-204ENST00000601038 TCTN2Q96GX1 697 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 CHRNA10Q9GZZ6 450 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 RBSNQ9H1K0 784 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 POLG2Q9UHN1 485 aa16.44■□□□□ 0.22
SCAF1-204ENST00000601038 CCDC78A2IDD5 438 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 OR51F1A6NGY5 319 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 CDH17Q12864 832 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 NCF4Q15080 339 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 ZNF385CQ66K41 422 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-204ENST00000601038 MED25Q71SY5 747 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 TAB3Q8N5C8 712 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-204ENST00000601038 C19orf47Q8N9M1 422 aaKnown RBP16.43■□□□□ 0.22
SCAF1-204ENST00000601038 TMEM102Q8N9M5 508 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-204ENST00000601038 OR52K1Q8NGK4 314 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 N4BP2L2Q92802 583 aaPredicted RBP16.43■□□□□ 0.22
SCAF1-204ENST00000601038 HES6Q96HZ4 224 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 OR2A14Q96R47 310 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 DHRS4Q9BTZ2 278 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 FAM60AQ9NP50 221 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 OR6C2Q9NZP2 312 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 ZNF451Q9Y4E5 1061 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 AP1M2Q9Y6Q5 423 aa16.43■□□□□ 0.22
SCAF1-204ENST00000601038 SLC5A10A0PJK1 596 aa16.42■□□□□ 0.22
SCAF1-204ENST00000601038 HEATR9A2RTY3 570 aa16.42■□□□□ 0.22
SCAF1-204ENST00000601038 CCDC162PA2VCL2 907 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms