RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LAMA2P24043 3122 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 SH3PXD2BA1X283 911 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 PRKD3O94806 890 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 GNPDA1P46926 289 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 IMPG1Q17R60 797 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 XAF1Q6GPH4 301 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 R3HCC1LQ7Z5L2 792 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 SNX20Q7Z614 316 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 NPAS4Q8IUM7 802 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 EGFL6Q8IUX8 553 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ZBTB2Q8N680 514 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 TBC1D15Q8TC07 691 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 FAM162AQ96A26 154 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 SDCCAG3Q96C92 435 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC22A12Q96S37 553 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ACTR8Q9H981 624 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 LRTM1Q9HBL6 345 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 LATS2Q9NRM7 1088 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 FAM118AQ9NWS6 357 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 DNAJB9Q9UBS3 223 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ANAPC1Q9H1A4 1944 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ELOVL7A1L3X0 281 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 CXCR6O00574 342 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ZNF182P17025 639 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 CRHBPP24387 322 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ACRV1P26436 265 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 SMAD3P84022 425 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 SEMG2Q02383 582 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 TAF12Q16514 161 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 BROXQ5VW32 411 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 GCNT7Q6ZNI0 430 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 ADGRG2Q8IZP9 1017 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 C8orf59Q8N0T1 100 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 C10orf111Q8N326 155 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 MIPOL1Q8TD10 442 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 TANKQ92844 425 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 AURKBQ96GD4 344 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 OR52E6Q96RD3 313 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 MBOAT4Q96T53 435 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 TUBA1CQ9BQE3 449 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 VN1R3Q9BXE9 311 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 AMBRA1Q9C0C7 1298 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 INVSQ9Y283 1065 aa19.81■□□□□ 0.76
SHKBP1-225ENST00000600733 K7EPI3 171 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC28A1O00337 649 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 GNGT2O14610 69 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 AREL1O15033 823 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 ITGALP20701 1170 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 TM4SF4P48230 202 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 CDH18Q13634 790 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 CBX2Q14781 532 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 GPRC6AQ5T6X5 926 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 CACHD1Q5VU97 1274 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 SPESP1Q6UW49 350 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 APCDD1Q8J025 514 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 TERB1Q8NA31 727 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 BPIFB6Q8NFQ5 453 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 LZICQ8WZA0 190 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 SNX19Q92543 992 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 OSBPL10Q9BXB5 764 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 PAIP1Q9H074 479 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 CLMPQ9H6B4 373 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 IRAK4Q9NWZ3 460 aa19.8■□□□□ 0.76
SHKBP1-225ENST00000600733 TRIM64BA6NI03 449 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 MANBAO00462 879 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 HPRP00739 348 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 TFPTP0C1Z6 253 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 BPIP17213 487 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 HNF1BP35680 557 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 PPP2R2BQ00005 443 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 MAD2L1Q13257 205 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ARHGEF7Q14155 803 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 CHRNA6Q15825 494 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ZNF783Q6ZMS7 281 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 TRIM46Q7Z4K8 759 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ZC3H7AQ8IWR0 971 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 NCLNQ969V3 563 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ULK4Q96C45 1275 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ALG14Q96F25 216 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 LHPPQ9H008 270 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 CRLS1Q9UJA2 301 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 SCN8AQ9UQD0 1980 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 SEC14L2O76054 403 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 TRBC1P01850 177 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 IL6P05231 212 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 PRKACGP22612 351 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 AP1S1P61966 158 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 GRSF1Q12849 480 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 NFATC3Q12968 1075 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 MEP1AQ16819 746 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 RUNDC3AQ59EK9 446 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ANKRD26P1Q6NSI1 321 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 TMEM179BQ7Z7N9 219 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 OR10Q1Q8NGQ4 319 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ACDQ96AP0 544 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 CLSTN3Q9BQT9 956 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 ABCG8Q9H221 673 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 HPS4Q9NQG7 708 aa19.79■□□□□ 0.76
SHKBP1-225ENST00000600733 GLYATL1P3A0A0U1RQE8 302 aa19.78■□□□□ 0.76
SHKBP1-225ENST00000600733 ARVCFO00192 962 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms