RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 UGT3A2Q3SY77 523 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 XKR5Q6UX68 686 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SIX5Q8N196 739 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 TEX9Q8N6V9 391 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 TSTD1Q8NFU3 115 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 CFAP61Q8NHU2 1237 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 MEAF6Q9HAF1 191 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 ZNHIT2Q9UHR6 403 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 TRIM33Q9UPN9 1127 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SLC17A4Q9Y2C5 497 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 PRKAB1Q9Y478 270 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 ANGPTL3Q9Y5C1 460 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 PCYT1BQ9Y5K3 369 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 ARHGEF33A8MVX0 844 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 C10orf142B7Z368 130 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 FPGTO14772 594 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 CCNT2O60583 730 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 ATP5HO75947 161 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 HNRNPA2B1P22626 353 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 PIK3CGP48736 1102 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 INHBCP55103 352 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 NFE2L1Q14494 772 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 PLA2G4EQ3MJ16 856 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 KANK2Q63ZY3 851 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 CLEC6AQ6EIG7 209 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 ANO7Q6IWH7 933 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 MBOAT1Q6ZNC8 495 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 GPRIN3Q6ZVF9 776 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 EFL1Q7Z2Z2 1120 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SYVN1Q86TM6 617 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 FBXO15Q8NCQ5 510 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 FBXL8Q96CD0 374 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 MAELQ96JY0 434 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 CCDC138Q96M89 665 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 OR52B2Q96RD2 323 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 FOXQ1Q9C009 403 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SLC32A1Q9H598 525 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 WDR55Q9H6Y2 383 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 NOL11Q9H8H0 719 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SLC12A4Q9UP95 1085 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SDHDO14521 159 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 LATO43561 262 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 CRCPO75575 148 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 JUNP05412 331 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 CEACAM5P06731 702 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 EPHA3P29320 983 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 CCR5P51681 352 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 KRT72Q14CN4 511 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 ATL1Q8WXF7 558 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 IPPKQ9H8X2 491 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 SLC23A2Q9UGH3 650 aa17.23■□□□□ 0.35
SHKBP1-224ENST00000600718 GOLGA8QA0A0J9YX86 632 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 GOLGA8OA6NCC3 632 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 GOLGA8NF8WBI6 632 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 KIF1CO43896 1103 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 KCNJ13O60928 360 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 OTCP00480 354 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 UROSP10746 265 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 KIAA1024LP59773 190 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 CDC16Q13042 620 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 SPRED3Q2MJR0 410 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 LSM12Q3MHD2 195 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 TMEM31Q5JXX7 168 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 METRNLQ641Q3 311 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 FAM83HQ6ZRV2 1179 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 LRRC70Q7Z2Q7 622 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 HOMEZQ8IX15 550 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 CHCHD4Q8N4Q1 142 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 CEP70Q8NHQ1 597 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 ACTRT2Q8TDY3 377 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 ATP6V1E2Q96A05 226 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 PPP1R36Q96LQ0 422 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 MYOCQ99972 504 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 NUSAP1Q9BXS6 441 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 OR52A5Q9H2C5 316 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 DNAJC15Q9Y5T4 150 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 UNC80Q8N2C7 3258 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 OR7A17O14581 309 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 ZNF217O75362 1048 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 C1orf105O95561 183 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 EPB42P16452 691 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 ACADLP28330 430 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 AKT2P31751 481 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 GDF5P43026 501 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 SCTRP47872 440 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 DMPKQ09013 629 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 TBCCQ15814 346 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 SCARF2Q96GP6 870 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 PRR11Q96HE9 360 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 CCDC106Q9BWC9 280 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 TXLNGQ9NUQ3 528 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 C2orf42Q9NWW7 574 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 ZNF225Q9UK10 706 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 CYP8B1Q9UNU6 501 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 HS3ST3A1Q9Y663 406 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
SHKBP1-224ENST00000600718 A0A1B0GTL3 188 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms