RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CTSL3PQ5NE16 218 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 TMEM164Q5U3C3 297 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 PTRHD1Q6GMV3 140 aaKnown RBP15.74■□□□□ 0.11
LSM4-206ENST00000600289 CENPUQ71F23 418 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 MAATS1Q7Z4T9 603 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 OOSP2Q86WS3 158 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 PDIK1LQ8N165 341 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 OTUD6BQ8N6M0 293 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 CALML6Q8TD86 181 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 KLHL6Q8WZ60 621 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 TAAR9Q96RI9 348 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 TWSG1Q9GZX9 223 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 LATS2Q9NRM7 1088 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 SIDT1Q9NXL6 827 aaKnown RBP15.74■□□□□ 0.11
LSM4-206ENST00000600289 MAD1L1Q9Y6D9 718 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 EFCAB8A8MWE9 144 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 GOLGA8KD6RF30 607 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 GOLGA8TH3BQL2 631 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 SLC28A2O43868 658 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 TUBB4AP04350 444 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 CCL4P13236 92 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 LEPRP48357 1165 aaKnown RBP15.73■□□□□ 0.11
LSM4-206ENST00000600289 CSRP3P50461 194 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 ITGA8P53708 1063 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 MC2RQ01718 297 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 KRT33BQ14525 404 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 CRYMQ14894 314 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 TMED2Q15363 201 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 MSS51Q4VC12 460 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 SPANXN3Q5MJ09 141 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 PLEKHS1Q5SXH7 462 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 ZNF470Q6ECI4 717 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 KMT5CQ86Y97 462 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 TBC1D21Q8IYX1 336 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
LSM4-206ENST00000600289 BBOF1Q8ND07 529 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 OR5K2Q8NHB8 316 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 KCNE4Q8WWG9 221 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 UBXN4Q92575 508 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 USP7Q93009 1102 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 TGM7Q96PF1 710 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 TEFMQ96QE5 360 aaKnown RBP15.73■□□□□ 0.11
LSM4-206ENST00000600289 FERD3LQ96RJ6 166 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 ASPSCR1Q9BZE9 553 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 FBXO8Q9NRD0 319 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 OCIAD1Q9NX40 245 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 POLG2Q9UHN1 485 aa15.73■□□□□ 0.11
LSM4-206ENST00000600289 UBA6A0AVT1 1052 aaPredicted RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 TLCD2A6NGC4 264 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 EFCAB7A8K855 629 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 IQCF5A8MTL0 148 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 A8MU76 341 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 PRAMEF10O60809 474 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 S1PR4O95977 384 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 ATP5DP30049 168 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 MAPK10P53779 464 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 EIF3BP55884 814 aaKnown RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 THOC5Q13769 683 aaKnown RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 FRG1Q14331 258 aaKnown RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 GBX1Q14549 363 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 HIF1AQ16665 826 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 SNAP47Q5SQN1 464 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 IRGCQ6NXR0 463 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 UNC5DQ6UXZ4 953 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 SPACA3Q8IXA5 215 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 KRT222Q8N1A0 295 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 OR52E1Q8NGJ3 308 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 C16orf45Q96MC5 204 aaPredicted RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 ERP44Q9BS26 406 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 ZPBPQ9BS86 351 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 FAM167BQ9BTA0 163 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 TRIT1Q9H3H1 467 aaKnown RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 C20orf96Q9NUD7 363 aaPredicted RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 HRASLS2Q9NWW9 162 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.72■□□□□ 0.11
LSM4-206ENST00000600289 KLHL3Q9UH77 587 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 CDC23Q9UJX2 597 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 COMMD10Q9Y6G5 202 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 TEX264Q9Y6I9 313 aa15.72■□□□□ 0.11
LSM4-206ENST00000600289 RELNP78509 3460 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 E7ESA3 106 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 KDM1AO60341 852 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 LIPCP11150 499 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 PKMP14618 531 aaKnown RBP15.71■□□□□ 0.11
LSM4-206ENST00000600289 ITGB6P18564 788 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 SLC1A2P43004 574 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 RPL21P46778 160 aaKnown RBP15.71■□□□□ 0.11
LSM4-206ENST00000600289 ARL4CP56559 192 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 RHDQ02161 417 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 CKAP4Q07065 602 aaKnown RBP15.71■□□□□ 0.11
LSM4-206ENST00000600289 HSPA14Q0VDF9 509 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 CACHD1Q5VU97 1274 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 STEAP4Q687X5 459 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 CYB5D1Q6P9G0 228 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 NAPRTQ6XQN6 538 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 GALNT7Q86SF2 657 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 KCNMB4Q86W47 210 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 DTX1Q86Y01 620 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 VRK3Q8IV63 474 aa15.71■□□□□ 0.11
LSM4-206ENST00000600289 CNTN4Q8IWV2 1026 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms