RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CPT1BQ92523 772 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 ELMO1Q92556 727 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 RNF31Q96EP0 1072 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 PPM1MQ96MI6 270 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 SERTAD3Q9UJW9 196 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 FARSAQ9Y285 508 aaKnown RBP15.33■□□□□ 0.04
VRK3-221ENST00000600284 CCDC78A2IDD5 438 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 CDC14CA4D256 554 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 MKRN2OSH3BPM6 223 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 AP3B1O00203 1094 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 KDM1AO60341 852 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 APRTP07741 180 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 FURINP09958 794 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 SHMT2P34897 504 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 GRIA1P42261 906 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 PRKG2Q13237 762 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 SNX1Q13596 522 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 IZUMO3Q5VZ72 239 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 FAM199XQ6PEV8 388 aaPredicted RBP15.32■□□□□ 0.04
VRK3-221ENST00000600284 FBXO38Q6PIJ6 1188 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 MICALCLQ6ZW33 695 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 SYVN1Q86TM6 617 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 APLFQ8IW19 511 aaPredicted RBP15.32■□□□□ 0.04
VRK3-221ENST00000600284 THAP4Q8WY91 577 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 TRAPPC9Q96Q05 1148 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 HGH1Q9BTY7 390 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 TSSK1BQ9BXA7 367 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 CHRNA10Q9GZZ6 450 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 ACTL8Q9H568 366 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 AKIRIN1Q9H9L7 192 aaPredicted RBP15.32■□□□□ 0.04
VRK3-221ENST00000600284 EIF2B3Q9NR50 452 aaKnown RBP15.32■□□□□ 0.04
VRK3-221ENST00000600284 ACTR10Q9NZ32 417 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 ASF1AQ9Y294 204 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 TCAF1Q9Y4C2 921 aa15.32■□□□□ 0.04
VRK3-221ENST00000600284 BHMG1C9JSJ3 638 aaPredicted RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 MEN1O00255 615 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 RAB40ALP0C0E4 278 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 CCDC175P0C221 793 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 ST6GAL1P15907 406 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 RPL22P35268 128 aaKnown RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 PMS2P54278 862 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 PRAMEP78395 509 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 SIX1Q15475 284 aaPredicted RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 UGT8Q16880 541 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 SYTL3Q4VX76 610 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 FASTKD1Q53R41 847 aaKnown RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 AARS2Q5JTZ9 985 aaKnown RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 PCID2Q5JVF3 399 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 PLEKHS1Q5SXH7 462 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 TCTN3Q6NUS6 607 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 SPESP1Q6UW49 350 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 ZNF534Q76KX8 674 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 PTRH1Q86Y79 214 aaKnown RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 SLC38A9Q8NBW4 561 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 PPHLN1Q8NEY8 458 aaKnown RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 OR5AR1Q8NGP9 310 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 OR6P1Q8NGX9 317 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 OR5K2Q8NHB8 316 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 MR1Q95460 341 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 ZNF778Q96MU6 729 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 CARD6Q9BX69 1037 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 XKR8Q9H6D3 395 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 ZNF71Q9NQZ8 489 aaPredicted RBP15.31■□□□□ 0.04
VRK3-221ENST00000600284 OR6C2Q9NZP2 312 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 SLC2A6Q9UGQ3 507 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 ANAPC5Q9UJX4 755 aa15.31■□□□□ 0.04
VRK3-221ENST00000600284 TMEM150CB9EJG8 249 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 OR1I1O60431 355 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 RFPL1O75677 317 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 HBQ1P09105 142 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 ETS1P14921 441 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 RORAP35398 523 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 CASRP41180 1078 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 GPS2Q13227 327 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 BRD3Q15059 726 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 DNAJC21Q5F1R6 531 aaKnown RBP15.3■□□□□ 0.04
VRK3-221ENST00000600284 UNC5AQ6ZN44 842 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 HOOK3Q86VS8 718 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 DSELQ8IZU8 1212 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 GLIS1Q8NBF1 620 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 TRIM58Q8NG06 486 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 OR1L3Q8NH93 324 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 ASZ1Q8WWH4 475 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 CLIP3Q96DZ5 547 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 TCTN2Q96GX1 697 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 DPH2Q9BQC3 489 aaPredicted RBP15.3■□□□□ 0.04
VRK3-221ENST00000600284 HOMER3Q9NSC5 361 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 ICKQ9UPZ9 632 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 MAN2B2Q9Y2E5 1009 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 PIKFYVEQ9Y2I7 2098 aa15.3■□□□□ 0.04
VRK3-221ENST00000600284 PYCARD-AS1I3L0S3 204 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 CHRM5P08912 532 aaPredicted RBP15.29■□□□□ 0.04
VRK3-221ENST00000600284 CYP2A7P20853 494 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 NPY2RP49146 381 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 TTPAP49638 278 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 ITGA1P56199 1179 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 CDK16Q00536 496 aa15.29■□□□□ 0.04
VRK3-221ENST00000600284 TLE1Q04724 770 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms