RNA–Protein interactions for RNA: ENST00000599909.1

RPS5-208, Transcript of ribosomal protein S5, human

TSL 2

Gene RPS5, Length 523 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS5-208	ENST00000599909	LDB2	O43679	373 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	CNOT3	O75175	753 aa	Known RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	DDAH2	O95865	285 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	APOC2	P02655	101 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	CTSB	P07858	339 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ITGAL	P20701	1170 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	MC4R	P32245	332 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	HADHB	P55084	474 aa	Known RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	BOP1	Q14137	746 aa	Known RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	SPARCL1	Q14515	664 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ZIC1	Q15915	447 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ANKRD20A2	Q5SQ80	823 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ANKRD20A1	Q5TYW2	823 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	C1orf189	Q5VU69	101 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ANKRD20A3	Q5VUR7	823 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ITPRIPL1	Q6GPH6	555 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	DENND5A	Q6IQ26	1287 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	SARM1	Q6SZW1	724 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	SNX20	Q7Z614	316 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	AMIGO1	Q86WK6	493 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	VSTM4	Q8IW00	320 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	RCOR2	Q8IZ40	523 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	CISD2	Q8N5K1	135 aa	Known RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	C19orf47	Q8N9M1	422 aa	Known RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	INPP5D	Q92835	1189 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	RANBP9	Q96S59	729 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	FAM118B	Q9BPY3	351 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	DPH2	Q9BQC3	489 aa	Predicted RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ANP32E	Q9BTT0	268 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	SPRTN	Q9H040	489 aa	Predicted RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	MVB12B	Q9H7P6	319 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ZDHHC3	Q9NYG2	299 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	ICK	Q9UPZ9	632 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	PADI2	Q9Y2J8	665 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	SPTBN1	Q01082	2364 aa	Known RBP	10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	CCDC88C	Q9P219	2028 aa		10.84	□□□□□ -0.67
RPS5-208	ENST00000599909	PIKFYVE	Q9Y2I7	2098 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	TRBV5-4	A0A0C4DH59	114 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	WIPF3	A6NGB9	483 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CFAP99	D6REC4	459 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CBFA2T2	O43439	604 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CBX6	O95503	412 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CRTAM	O95727	393 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	LDLR	P01130	860 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	HBQ1	P09105	142 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	TPM1	P09493	284 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	UGT2B7	P16662	529 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	AGXT	P21549	392 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	ACRV1	P26436	265 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	VARS	P26640	1264 aa	Known RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	DCT	P40126	519 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	GABRA4	P48169	554 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CD151	P48509	253 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	OTUD4	Q01804	1114 aa	Known RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	SLC9A5	Q14940	896 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	DCAF10	Q5QP82	559 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	MLIP	Q5VWP3	458 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	SPESP1	Q6UW49	350 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	SERPINA9	Q86WD7	417 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	GPR135	Q8IZ08	494 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	IQCK	Q8N0W5	287 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CLDN19	Q8N6F1	224 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	OR5AR1	Q8NGP9	310 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CCDC110	Q8TBZ0	833 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	ACTL9	Q8TC94	416 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	TFG	Q92734	400 aa	Predicted RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	DNAJC1	Q96KC8	554 aa	Known RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	GBP5	Q96PP8	586 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	TBL1Y	Q9BQ87	522 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	DHRS4	Q9BTZ2	278 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	C5AR2	Q9P296	337 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	CDYL	Q9Y232	598 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	B3GNT3	Q9Y2A9	372 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	AAR2	Q9Y312	384 aa	Known RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	PTRH2	Q9Y3E5	179 aa	Known RBP	10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	NUP210L	Q5VU65	1888 aa		10.83	□□□□□ -0.68
RPS5-208	ENST00000599909	MACROD2	A1Z1Q3	448 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	KCNN4	O15554	427 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	MAP3K7	O43318	606 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	OR2B3	O76000	313 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	TPBGL	P0DKB5	382 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	HADHA	P40939	763 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	FOLR3	P41439	243 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	MAGEA1	P43355	309 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	RPA4	Q13156	261 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	PRPSAP1	Q14558	356 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	SSPN	Q14714	243 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	MYBPC3	Q14896	1274 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	GPR33	Q49SQ1	333 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	ZRANB3	Q5FWF4	1079 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	CRB2	Q5IJ48	1285 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	CCDC181	Q5TID7	509 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	RHBDD2	Q6NTF9	364 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	UNC5A	Q6ZN44	842 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	GALNT16	Q8N428	558 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	FLVCR1-AS1	Q8TAF5	88 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	HEXDC	Q8WVB3	486 aa		10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	N4BP2L2	Q92802	583 aa	Predicted RBP	10.82	□□□□□ -0.68
RPS5-208	ENST00000599909	OR2A14	Q96R47	310 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms