RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SH3BP2P78314 561 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 LONRF1Q17RB8 773 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 DNAJC21Q5F1R6 531 aaKnown RBP20.48■□□□□ 0.87
PNKP-209ENST00000596726 ZNF789Q5FWF6 425 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 DNTTIP2Q5QJE6 756 aaKnown RBP20.48■□□□□ 0.87
PNKP-209ENST00000596726 HIBCHQ6NVY1 386 aaPredicted RBP20.48■□□□□ 0.87
PNKP-209ENST00000596726 ARMC6Q6NXE6 501 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 KMT5CQ86Y97 462 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 CARFQ8N187 725 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 OR5K2Q8NHB8 316 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 KRT12Q99456 494 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 CTRCQ99895 268 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 TWSG1Q9GZX9 223 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 TRIT1Q9H3H1 467 aaKnown RBP20.48■□□□□ 0.87
PNKP-209ENST00000596726 INTS10Q9NVR2 710 aaKnown RBP20.48■□□□□ 0.87
PNKP-209ENST00000596726 POLG2Q9UHN1 485 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 MGAQ8IWI9 3026 aa20.48■□□□□ 0.87
PNKP-209ENST00000596726 H3BMM5 538 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 STMND1H3BQB6 276 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 MATN2O00339 956 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 BTN3A1O00481 513 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 POLR1CO15160 346 aaPredicted RBP20.47■□□□□ 0.87
PNKP-209ENST00000596726 TP73O15350 636 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 PGAM1P18669 254 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 TMPRSS3P57727 454 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 THOC5Q13769 683 aaKnown RBP20.47■□□□□ 0.87
PNKP-209ENST00000596726 ZNF470Q6ECI4 717 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 AMIGO1Q86WK6 493 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 LMNTD2Q8IXW0 634 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 ADGRF3Q8IZF5 1079 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 SPATA4Q8NEY3 305 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 EBNA1BP2Q99848 306 aaKnown RBP20.47■□□□□ 0.87
PNKP-209ENST00000596726 LATS2Q9NRM7 1088 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 POMT2Q9UKY4 750 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 ICKQ9UPZ9 632 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 VPS9D1Q9Y2B5 631 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 CRYL1Q9Y2S2 319 aa20.47■□□□□ 0.87
PNKP-209ENST00000596726 EFSO43281 561 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 BANF1O75531 89 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 SEC31AO94979 1220 aaKnown RBP20.46■□□□□ 0.87
PNKP-209ENST00000596726 PRKAA1Q13131 559 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 CTBP1Q13363 440 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 GBX1Q14549 363 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 IL11RAQ14626 422 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 TMED2Q15363 201 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 PLEKHS1Q5SXH7 462 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 IGDCC3Q8IVU1 814 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 DENND6AQ8IWF6 608 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.46■□□□□ 0.87
PNKP-209ENST00000596726 SNRNP27Q8WVK2 155 aaKnown RBP20.46■□□□□ 0.87
PNKP-209ENST00000596726 PPM1MQ96MI6 270 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 CCNL2Q96S94 520 aaPredicted RBP20.46■□□□□ 0.87
PNKP-209ENST00000596726 NAT9Q9BTE0 207 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 XKR8Q9H6D3 395 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 CPNE5Q9HCH3 593 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 C20orf96Q9NUD7 363 aaPredicted RBP20.46■□□□□ 0.87
PNKP-209ENST00000596726 TMEM184BQ9Y519 407 aaPredicted RBP20.46■□□□□ 0.87
PNKP-209ENST00000596726 PCDHB11Q9Y5F2 797 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 LOC400499M0QZD8 3231 aa20.46■□□□□ 0.87
PNKP-209ENST00000596726 NIPSNAP2O75323 286 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 TTC4O95801 387 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 FGF5P12034 268 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 PKMP14618 531 aaKnown RBP20.45■□□□□ 0.86
PNKP-209ENST00000596726 SHMT2P34897 504 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 ITGA8P53708 1063 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 FOXM1Q08050 763 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 CRYMQ14894 314 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 BBS9Q3SYG4 887 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 UNC5DQ6UXZ4 953 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 OTOAQ7RTW8 1153 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 UNC5BQ8IZJ1 945 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 D2HGDHQ8N465 521 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 SIDT2Q8NBJ9 832 aaKnown RBP20.45■□□□□ 0.86
PNKP-209ENST00000596726 CALML6Q8TD86 181 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 NKD1Q969G9 470 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 SNF8Q96H20 258 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 PWWP2AQ96N64 755 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 OR6C1Q96RD1 312 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 C1GALT1Q9NS00 363 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 PILRAQ9UKJ1 303 aa20.45■□□□□ 0.86
PNKP-209ENST00000596726 SNRNP200O75643 2136 aaKnown RBP20.45■□□□□ 0.86
PNKP-209ENST00000596726 EFCAB8A8MWE9 144 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 ZBTB11O95625 1053 aaPredicted RBP20.44■□□□□ 0.86
PNKP-209ENST00000596726 FOLR1P15328 257 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 PRDX3P30048 256 aaKnown RBP20.44■□□□□ 0.86
PNKP-209ENST00000596726 SLC1A2P43004 574 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 CXADRP78310 365 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 HSD11B2P80365 405 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 VAC14Q08AM6 782 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 ABRQ12979 859 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 SRSF6Q13247 344 aaKnown RBP20.44■□□□□ 0.86
PNKP-209ENST00000596726 KYNUQ16719 465 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 HSP90AA5PQ58FG0 334 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 SPANXN3Q5MJ09 141 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 UNC5AQ6ZN44 842 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 PDIK1LQ8N165 341 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 MENTQ9BUN1 341 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 PITPNM3Q9BZ71 974 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 PLAC1Q9HBJ0 212 aa20.44■□□□□ 0.86
PNKP-209ENST00000596726 FBXO6Q9NRD1 293 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms