RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 DKK3Q9UBP4 350 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 CNOT6Q9ULM6 557 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 DYTNA2CJ06 578 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CLDN25C9JDP6 229 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 SOCS2O14508 198 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 JUNBP17275 347 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CSNK1DP48730 415 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 PSME3P61289 254 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CLCQ05315 142 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 MERTKQ12866 999 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CBX2Q14781 532 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CDKN3Q16667 212 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 SLC36A3Q495N2 470 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 C22orf39Q6P5X5 142 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 LINC00299Q6ZSB3 139 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 KCTD8Q6ZWB6 473 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 METTL3Q86U44 580 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 DDIASQ8IXT1 998 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 NAT16Q8N8M0 369 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 OR13F1Q8NGS4 319 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 RAB2BQ8WUD1 216 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ING5Q8WYH8 240 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 NAA50Q9GZZ1 169 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CD274Q9NZQ7 290 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 GIMAP2Q9UG22 337 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 PSME2Q9UL46 239 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 GLYATL1P3A0A0U1RQE8 302 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 AZIN1O14977 448 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 PER2O15055 1255 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 TRIM24O15164 1050 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 SNX2O60749 519 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 TYRP14679 529 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ZNF7P17097 686 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 TCN1P20061 433 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ITGALP20701 1170 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 RPL10P27635 214 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 HK3P52790 923 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ARHGAP15Q53QZ3 475 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ABRAXAS1Q6UWZ7 409 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 CERS6Q6ZMG9 384 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 DPY19L3Q6ZPD9 716 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 SNX20Q7Z614 316 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 GPSM1Q86YR5 675 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ZSWIM3Q96MP5 696 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 WDR12Q9GZL7 423 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ABCG8Q9H221 673 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 HS3ST2Q9Y278 367 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
SHKBP1-205ENST00000594973 PIP5K1BO14986 540 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 GRM6O15303 877 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 UGT2B4P06133 528 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 SYN1P17600 705 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 LBX1P52954 281 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 ECT2LQ008S8 904 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 LCP2Q13094 533 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 CHRNA6Q15825 494 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 ANKS6Q68DC2 871 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 Q6ZVU0 165 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 ERMP1Q7Z2K6 904 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 TMCO5AQ8N6Q1 288 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 HMGCLL1Q8TB92 370 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 TWIST2Q8WVJ9 160 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 IRF7Q92985 503 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 VOPP1Q96AW1 172 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 ASIC4Q96FT7 647 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 ASB2Q96Q27 587 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 MRGBPQ9NV56 204 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 CRLS1Q9UJA2 301 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 SLC25A13Q9UJS0 675 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 SARDHQ9UL12 918 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 BTRCQ9Y297 605 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 PCDHGA7Q9Y5G6 932 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 PRSS21Q9Y6M0 314 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 DLGAP1O14490 977 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 CRCPO75575 148 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 TRIM16O95361 564 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 GNAO1P09471 354 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 MYOGP15173 224 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 CKMT2P17540 419 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 PFKLP17858 780 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 PRDX3P30048 256 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 WEE1P30291 646 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 FASTKQ14296 549 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 AGKQ53H12 422 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 LY6G5CQ5SRR4 150 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 LRRC66Q68CR7 880 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 UGT3A1Q6NUS8 523 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 CRTC1Q6UUV9 634 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 LARP4Q71RC2 724 aaKnown RBP eCLIP16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 GRASPQ7Z6J2 395 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 MMAAQ8IVH4 418 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 FAM156AQ8NDB6 213 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 SP7Q8TDD2 431 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 SUV39H2Q9H5I1 410 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 AKTIPQ9H8T0 292 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 MOV10Q9HCE1 1003 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms