RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 UBTD2Q8WUN7 234 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 RORBQ92753 470 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 ADGRE3Q9BY15 652 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SCUBE2Q9NQ36 999 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SLC25A37Q9NYZ2 338 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 TRPS1Q9UHF7 1281 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 INTS6Q9UL03 887 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 FFAR2O15552 330 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 ANGPTL1O95841 491 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 EIF2S1P05198 315 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 PGRP06401 933 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 TGM1P22735 817 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CDH4P55283 916 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 RPL38P63173 70 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 VARS2Q5ST30 1063 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 CACHD1Q5VU97 1274 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SDHAF4Q5VUM1 108 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SPRYD7Q5W111 196 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CERS6Q6ZMG9 384 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 MIB1Q86YT6 1006 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CHPFQ8IZ52 775 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 FAM9CQ8IZT9 166 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 MFSD4AQ8N468 514 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 OR6Q1Q8NGQ2 317 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 SLC35B4Q969S0 331 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 KCNH6Q9H252 994 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
VRK3-209ENST00000594948 IPPKQ9H8X2 491 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 CCNB1IP1Q9NPC3 277 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 INVSQ9Y283 1065 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 TMED5Q9Y3A6 229 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 OARD1Q9Y530 152 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 DGKBQ9Y6T7 804 aa12.99□□□□□ -0.33
VRK3-209ENST00000594948 A0A096LPI6 279 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 TRIM43BA6NCK2 446 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 M0R3G1 203 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 WNT9AO14904 365 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 STX7O15400 261 aaKnown RBP12.98□□□□□ -0.33
VRK3-209ENST00000594948 AQP9O43315 295 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 OR1I1O60431 355 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 DUSP11O75319 330 aaKnown RBP12.98□□□□□ -0.33
VRK3-209ENST00000594948 E2F6O75461 281 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 AKR1A1P14550 325 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 RPS3P23396 243 aaKnown RBP eCLIP12.98□□□□□ -0.33
VRK3-209ENST00000594948 MAGEA10P43363 369 aaPredicted RBP12.98□□□□□ -0.33
VRK3-209ENST00000594948 GNPDA1P46926 289 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 RGRP47804 291 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 SLC35A2P78381 396 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 CACNG1Q06432 222 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 FAM174BQ3ZCQ3 159 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 ZRANB3Q5FWF4 1079 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 CAPN13Q6MZZ7 669 aaPredicted RBP12.98□□□□□ -0.33
VRK3-209ENST00000594948 DET1Q7L5Y6 550 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 TMEM179BQ7Z7N9 219 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 LGI2Q8N0V4 545 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 LPCAT1Q8NF37 534 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 DYNC2LI1Q8TCX1 351 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 MYEOVQ96EZ4 313 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 PYURFQ96I23 114 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 ZNF300Q96RE9 604 aaPredicted RBP12.98□□□□□ -0.33
VRK3-209ENST00000594948 C19orf43Q9BQ61 176 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
VRK3-209ENST00000594948 IKZF5Q9H5V7 419 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
VRK3-209ENST00000594948 ANKRD66B4E2M5 251 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 PRMT5O14744 637 aaPredicted RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 SYN3O14994 580 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ACSL4O60488 711 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 XYLBO75191 536 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 FKBP9O95302 570 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 TBX18O95935 607 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 F11P03951 625 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 HMBSP08397 361 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 ZDHHC11BP0C7U3 371 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 TMED10P49755 219 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 PIGFQ07326 219 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 DSC1Q08554 894 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ABHD18Q0P651 414 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 FADDQ13158 208 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 TTC23LQ6PF05 361 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 LRRC8DQ7L1W4 858 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 ZBTB46Q86UZ6 589 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 LACC1Q8IV20 430 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 HS3ST5Q8IZT8 346 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 DCBLD1Q8N8Z6 715 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 OR7D4Q8NG98 312 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 MCOLN3Q8TDD5 553 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms