RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PIPSLA2A3N6 862 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 C2orf74A8MZ97 194 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 PYCARD-AS1I3L0S3 204 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 RECKO95980 971 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 FGGP02679 453 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 ACADLP28330 430 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 PPARGP37231 505 aaPredicted RBP22.77■■□□□ 1.24
LSM4-204ENST00000594828 SYTL3Q4VX76 610 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 FAM199XQ6PEV8 388 aaPredicted RBP22.77■■□□□ 1.24
LSM4-204ENST00000594828 C4orf22Q6V702 233 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 ZNF534Q76KX8 674 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 GSTA5Q7RTV2 222 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 ADGRF3Q8IZF5 1079 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 TRIM58Q8NG06 486 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 OR5AR1Q8NGP9 310 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 SGSM3Q96HU1 749 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 GPR87Q9BY21 358 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 SYTL2Q9HCH5 934 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 POLHQ9Y253 713 aa22.77■■□□□ 1.24
LSM4-204ENST00000594828 FURINP09958 794 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 ST6GAL1P15907 406 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 PCID2Q5JVF3 399 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 PTRH1Q86Y79 214 aaKnown RBP22.76■■□□□ 1.23
LSM4-204ENST00000594828 TBC1D21Q8IYX1 336 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 C9orf43Q8TAL5 461 aaPredicted RBP22.76■■□□□ 1.23
LSM4-204ENST00000594828 PITPNM3Q9BZ71 974 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 TWSG1Q9GZX9 223 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 EIF2B3Q9NR50 452 aaKnown RBP22.76■■□□□ 1.23
LSM4-204ENST00000594828 CHRAC1Q9NRG0 131 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 ACTR10Q9NZ32 417 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 POLG2Q9UHN1 485 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 ANAPC5Q9UJX4 755 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 ICKQ9UPZ9 632 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 KCNMB2Q9Y691 235 aa22.76■■□□□ 1.23
LSM4-204ENST00000594828 PIKFYVEQ9Y2I7 2098 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 HELZ2Q9BYK8 2649 aaKnown RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 CDC14CA4D256 554 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 BHMG1C9JSJ3 638 aaPredicted RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 KLK3P07288 261 aaPredicted RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 SHMT2P34897 504 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 SESN2P58004 480 aaPredicted RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 RPS15P62841 145 aaKnown RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 BASP1P80723 227 aaKnown RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 SLC38A9Q8NBW4 561 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 MR1Q95460 341 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 ABHD17AQ96GS6 310 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 TRAPPC9Q96Q05 1148 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 ACTL8Q9H568 366 aa22.75■■□□□ 1.23
LSM4-204ENST00000594828 TDRKHQ9Y2W6 561 aaKnown RBP22.75■■□□□ 1.23
LSM4-204ENST00000594828 CEP104O60308 925 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 MSL3P1P0C860 447 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 KCNJ1P48048 391 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 GPS2Q13227 327 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 SEMA3AQ14563 771 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 AARS2Q5JTZ9 985 aaKnown RBP22.74■■□□□ 1.23
LSM4-204ENST00000594828 PRAMEF17Q5VTA0 474 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 UNC5AQ6ZN44 842 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 HOOK3Q86VS8 718 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 OR5K2Q8NHB8 316 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 CPT1BQ92523 772 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 LRFN5Q96NI6 719 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 RUFY1Q96T51 708 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 TSSK1BQ9BXA7 367 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 KLHL25Q9H0H3 589 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 ZNF71Q9NQZ8 489 aaPredicted RBP22.74■■□□□ 1.23
LSM4-204ENST00000594828 CATSPERZQ9NTU4 200 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 SERTAD3Q9UJW9 196 aa22.74■■□□□ 1.23
LSM4-204ENST00000594828 TMEM150CB9EJG8 249 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 AP3B1O00203 1094 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 NRDCO43847 1150 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 PVRP15151 417 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 PTPN4P29074 926 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 CCR7P32248 378 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 CXCR5P32302 372 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 NPY2RP49146 381 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 CSE1LP55060 971 aaKnown RBP22.73■■□□□ 1.23
LSM4-204ENST00000594828 CCZ1BP86790 482 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 CCZ1P86791 482 aaPredicted RBP22.73■■□□□ 1.23
LSM4-204ENST00000594828 KCNC4Q03721 635 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 SPESP1Q6UW49 350 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 ZNF517Q6ZMY9 492 aaPredicted RBP22.73■■□□□ 1.23
LSM4-204ENST00000594828 LDB1Q86U70 411 aaPredicted RBP22.73■■□□□ 1.23
LSM4-204ENST00000594828 TMEM135Q86UB9 458 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 OR1L3Q8NH93 324 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 SEC14L1Q92503 715 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 CLIP3Q96DZ5 547 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 CARD6Q9BX69 1037 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 TRIM4Q9C037 500 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 IL22Q9GZX6 179 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 HOMER3Q9NSC5 361 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 BFARQ9NZS9 450 aa22.73■■□□□ 1.23
LSM4-204ENST00000594828 FARSAQ9Y285 508 aaKnown RBP22.73■■□□□ 1.23
LSM4-204ENST00000594828 MEN1O00255 615 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 CD3EAPO15446 510 aaKnown RBP22.72■■□□□ 1.23
LSM4-204ENST00000594828 KDM1AO60341 852 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 WISP1O95388 367 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 TPBGLP0DKB5 382 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 CRADDP78560 199 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 HSPA14Q0VDF9 509 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 ABRQ12979 859 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms