RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CAMK1DQ8IU85 385 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 OR6K2Q8NGY2 324 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 TTC9Q92623 222 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 SNX18Q96RF0 628 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 WDR55Q9H6Y2 383 aaPredicted RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 EFCAB1Q9HAE3 211 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 FBXO8Q9NRD0 319 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 NLE1Q9NVX2 485 aaPredicted RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 INTS6Q9UL03 887 aaKnown RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 RIMKLBQ9ULI2 386 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 VWA7Q9Y334 891 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 RANBP2P49792 3224 aaKnown RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 A0A0U1RQS6 177 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 NEMP2A6NFY4 417 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 ANKRD66B4E2M5 251 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 TAF4O00268 1085 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 PER2O15055 1255 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 CD3EAPO15446 510 aaKnown RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 PRAMEF12O95522 483 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 GLP2RO95838 553 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 LTA4HP09960 611 aaKnown RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 POLR2IP36954 125 aaKnown RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 MAPK10P53779 464 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 TAF1AQ15573 450 aaPredicted RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 TECRLQ5HYJ1 363 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 OR4K2Q8NGD2 314 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 FIBINQ8TAL6 211 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 VPS33AQ96AX1 596 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 CDKN2AIPNLQ96HQ2 116 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 RUBCNLQ9H714 662 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 KCNN3Q9UGI6 736 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 CRYL1Q9Y2S2 319 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 GRID2O43424 1007 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 NPHS1O60500 1241 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 SEC24DO94855 1032 aaPredicted RBP15.1■□□□□ 0.01
PNKP-204ENST00000594661 ITIH1P19827 911 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 CASP3P42574 277 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 CDKN2DP55273 166 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 PLEKHG6Q3KR16 790 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 AASDHQ4L235 1098 aaPredicted RBP15.1■□□□□ 0.01
PNKP-204ENST00000594661 RETSATQ6NUM9 610 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 SNX29P2Q8IUI4 249 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 EFHBQ8N7U6 833 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 GPR150Q8NGU9 434 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 OR4L1Q8NH43 312 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 STON2Q8WXE9 905 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 NRBF2Q96F24 287 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 LMLNQ96KR4 655 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 ADGRE3Q9BY15 652 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 CYP4F12Q9HCS2 524 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 CATSPERZQ9NTU4 200 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 VTI1BQ9UEU0 232 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 MTF2Q9Y483 593 aaPredicted RBP15.1■□□□□ 0.01
PNKP-204ENST00000594661 HCFC2Q9Y5Z7 792 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 PDE4DIPQ5VU43 2346 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 SLCO1B7G3V0H7 640 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 CCRL2O00421 344 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 SNPHO15079 494 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 FZD6O60353 706 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 FGF19O95750 216 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 CA3P07451 260 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 NAGAP17050 411 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 DDX6P26196 483 aaKnown RBP eCLIP15.1■□□□□ 0.01
PNKP-204ENST00000594661 DNAJB13P59910 316 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 ART3Q13508 389 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.1■□□□□ 0.01
PNKP-204ENST00000594661 UBE2UQ5VVX9 321 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 ERMP1Q7Z2K6 904 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 PIWIL4Q7Z3Z4 852 aaKnown RBP15.1■□□□□ 0.01
PNKP-204ENST00000594661 TMEM25Q86YD3 366 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 FAM156AQ8NDB6 213 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 SIMC1Q8NDZ2 872 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 ZFP90Q8TF47 636 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 ANKRD49Q8WVL7 239 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 MAGED4Q96JG8 741 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 UBXN10Q96LJ8 280 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
PNKP-204ENST00000594661 FANCEQ9HB96 536 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 ABCB8Q9NUT2 735 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 PCDHB9Q9Y5E1 797 aa15.1■□□□□ 0.01
PNKP-204ENST00000594661 MYOFQ9NZM1 2061 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 EVPLLA8MZ36 301 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 B8ZZF3 427 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 HAT1O14929 419 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 TMCC2O75069 709 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 CYBBP04839 570 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 RBP1P09455 135 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 CTRB1P17538 263 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 HLA-FP30511 346 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 HOXA9P31269 272 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 GKP32189 559 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 CTSOP43234 321 aaPredicted RBP15.09■□□□□ 0.01
PNKP-204ENST00000594661 AQP6Q13520 282 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 ARHGAP15Q53QZ3 475 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 PRSS36Q5K4E3 855 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 C9orf50Q5SZB4 431 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 XAF1Q6GPH4 301 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 CTRB2Q6GPI1 263 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 MRNIPQ6NTE8 343 aa15.09■□□□□ 0.01
PNKP-204ENST00000594661 ZNF549Q6P9A3 640 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms