RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 AP2A2O94973 939 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 GNLYP22749 145 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 ITGA1P56199 1179 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 NCF4Q15080 339 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 PARP6Q2NL67 630 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 PTCHD3Q3KNS1 767 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 FAM69BQ5VUD6 431 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 CDHR3Q6ZTQ4 885 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 TAS2R42Q7RTR8 314 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 HPS6Q86YV9 775 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 CLDN19Q8N6F1 224 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 TMEM102Q8N9M5 508 aaPredicted RBP23.17■■□□□ 1.3
LSM4-202ENST00000593564 ALG3Q92685 438 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 XKR8Q9H6D3 395 aa23.17■■□□□ 1.3
LSM4-202ENST00000593564 G3BP2Q9UN86 482 aaKnown RBP23.17■■□□□ 1.3
LSM4-202ENST00000593564 EPN1Q9Y6I3 576 aaPredicted RBP23.17■■□□□ 1.3
LSM4-202ENST00000593564 PRRC2CQ9Y520 2896 aaKnown RBP23.17■■□□□ 1.3
LSM4-202ENST00000593564 UTP20O75691 2785 aaKnown RBP23.16■■□□□ 1.3
LSM4-202ENST00000593564 BTNL10A8MVZ5 291 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 HBQ1P09105 142 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 PRSS56P0CW18 603 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 PVRP15151 417 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 CACNG1Q06432 222 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 PRKG2Q13237 762 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 ZNF385CQ66K41 422 aaPredicted RBP23.16■■□□□ 1.3
LSM4-202ENST00000593564 AADACL2Q6P093 401 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 SPESP1Q6UW49 350 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 ARHGEF18Q6ZSZ5 1173 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 MICALCLQ6ZW33 695 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 MED25Q71SY5 747 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 ZBTB2Q8N680 514 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 FDCSPQ8NFU4 85 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 SLC7A5P2Q9GIP4 190 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 KLHL25Q9H0H3 589 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 LRRC4CQ9HCJ2 640 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 DUSP10Q9Y6W6 482 aa23.16■■□□□ 1.3
LSM4-202ENST00000593564 C9J4A7 227 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 ZNF749O43361 778 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 DPM1O60762 260 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 RRADP55042 308 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 NAP1L1P55209 391 aaKnown RBP23.15■■□□□ 1.3
LSM4-202ENST00000593564 DBN1Q16643 649 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 FHL5Q5TD97 284 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 PIANPQ8IYJ0 282 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 GLIS1Q8NBF1 620 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 STYXQ8WUJ0 223 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 CDKN2AIPNLQ96HQ2 116 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 PANX2Q96RD6 677 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 DHRS4Q9BTZ2 278 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 NUDT9Q9BW91 350 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 LRRC40Q9H9A6 602 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 ICKQ9UPZ9 632 aa23.15■■□□□ 1.3
LSM4-202ENST00000593564 ICE1Q9Y2F5 2266 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 SOWAHDA6NJG2 315 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 LIN7AO14910 233 aaPredicted RBP23.14■■□□□ 1.29
LSM4-202ENST00000593564 ZNF185O15231 689 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 TPH1P17752 444 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 AGXTP21549 392 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 JMJD6Q6NYC1 403 aaPredicted RBP23.14■■□□□ 1.29
LSM4-202ENST00000593564 GPR135Q8IZ08 494 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 LRRC57Q8N9N7 239 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.14■■□□□ 1.29
LSM4-202ENST00000593564 PADI2Q9Y2J8 665 aa23.14■■□□□ 1.29
LSM4-202ENST00000593564 NBPF19A0A087WUL8 3843 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 QSOX1O00391 747 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 AGFG2O95081 481 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 IPO7O95373 1038 aaKnown RBP23.13■■□□□ 1.29
LSM4-202ENST00000593564 METTL18O95568 372 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 PSMA3P25788 255 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 SHMT2P34897 504 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 ATP1A4Q13733 1029 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 ITIH4Q14624 930 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 POU6F1Q14863 301 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 HOOK3Q86VS8 718 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 RAB43Q86YS6 212 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 TMTC1Q8IUR5 882 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 C19orf47Q8N9M1 422 aaKnown RBP23.13■■□□□ 1.29
LSM4-202ENST00000593564 FAM71DQ8N9W8 422 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 TTC13Q8NBP0 860 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 OR5AR1Q8NGP9 310 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 TCTN2Q96GX1 697 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 C17orf62Q9BQA9 187 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 CHRNA10Q9GZZ6 450 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 GPR83Q9NYM4 423 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 SMARCAL1Q9NZC9 954 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 REXO2Q9Y3B8 237 aaKnown RBP23.13■■□□□ 1.29
LSM4-202ENST00000593564 SHANK1Q9Y566 2161 aa23.13■■□□□ 1.29
LSM4-202ENST00000593564 GRID2IPA4D2P6 1211 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 GOLGA6L9A6NEM1 432 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 A6NL46 340 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 H3BMH7 237 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 KLF7O75840 302 aaPredicted RBP23.12■■□□□ 1.29
LSM4-202ENST00000593564 ACADLP28330 430 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 NSG1P42857 185 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 INPP5JQ15735 1006 aaPredicted RBP23.12■■□□□ 1.29
LSM4-202ENST00000593564 P3H1Q32P28 736 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 PACS1Q6VY07 963 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 UNC5AQ6ZN44 842 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 TRIM73Q86UV7 250 aa23.12■■□□□ 1.29
LSM4-202ENST00000593564 Q8NA96 180 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms