RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ZCCHC2Q9C0B9 1178 aaKnown RBP17.54■□□□□ 0.4
VAT1-208ENST00000590924 ZDHHC18Q9NUE0 388 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 IL17BQ9UHF5 180 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 CRLS1Q9UJA2 301 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 IGLV3-16A0A075B6K0 115 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ZCWPW2A0A1B0GU75 182 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 CCDC78A2IDD5 438 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 CCL22O00626 93 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 KCNJ13O60928 360 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ELK3P41970 407 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 STAT5AP42229 794 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 CAPZBP47756 277 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ARCN1P48444 511 aaKnown RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 DMPKQ09013 629 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 PDIA2Q13087 525 aaKnown RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 KCNAB2Q13303 367 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 GPR18Q14330 331 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 FRG1Q14331 258 aaKnown RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 CRTC2Q53ET0 693 aaPredicted RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 FASTKD1Q53R41 847 aaKnown RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 AARS2Q5JTZ9 985 aaKnown RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 SPANXN3Q5MJ09 141 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 PRSS42Q7Z5A4 293 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 UNC5BQ8IZJ1 945 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ESX1Q8N693 406 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 GPR150Q8NGU9 434 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 GDAP1Q8TB36 358 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 RSC1A1Q92681 617 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ZNF514Q96K75 400 aaPredicted RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 PWWP2AQ96N64 755 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 TCF12Q99081 682 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ZDHHC3Q9NYG2 299 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 MTRF1LQ9UGC7 380 aaKnown RBP17.53■□□□□ 0.4
VAT1-208ENST00000590924 SPTBP11277 2137 aa17.53■□□□□ 0.4
VAT1-208ENST00000590924 ESYT3A0FGR9 886 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 CD3EAPO15446 510 aaKnown RBP17.52■□□□□ 0.4
VAT1-208ENST00000590924 NKX2-8O15522 239 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 VAPBO95292 243 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 RALBP11234 206 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 ACRV1P26436 265 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 ARNTP27540 789 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 HALP42357 657 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 LEPRP48357 1165 aaKnown RBP17.52■□□□□ 0.4
VAT1-208ENST00000590924 MC1RQ01726 317 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 FOXM1Q08050 763 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 ITIH4Q14624 930 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 IL11RAQ14626 422 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 LONRF1Q17RB8 773 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 STEAP4Q687X5 459 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 CES3Q6UWW8 571 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 TAS2R42Q7RTR8 314 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 IGDCC3Q8IVU1 814 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.52■□□□□ 0.44e-6■■■■■ 65.1
VAT1-208ENST00000590924 GABPB2Q8TAK5 448 aaPredicted RBP17.52■□□□□ 0.4
VAT1-208ENST00000590924 STARD8Q92502 1023 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 ZNF669Q96BR6 464 aaPredicted RBP17.52■□□□□ 0.4
VAT1-208ENST00000590924 COPS8Q99627 209 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 ULBP3Q9BZM4 244 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 RAB33BQ9H082 229 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 CATSPERZQ9NTU4 200 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 EPHA6Q9UF33 1036 aa17.52■□□□□ 0.4
VAT1-208ENST00000590924 ZC3H7BQ9UGR2 993 aaKnown RBP17.52■□□□□ 0.4
VAT1-208ENST00000590924 DNMT3AQ9Y6K1 912 aaPredicted RBP17.52■□□□□ 0.4
VAT1-208ENST00000590924 NBASA2RRP1 2371 aa17.52■□□□□ 0.39
VAT1-208ENST00000590924 DOPEY2Q9Y3R5 2298 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 CFAP99D6REC4 459 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 PFDN6O15212 129 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 RASSF9O75901 435 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 GSTA2P09210 222 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 RHOXF2BP0C7M4 288 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 PRKAR1AP10644 381 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 MSH3P20585 1137 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 OAS2P29728 719 aaKnown RBP17.51■□□□□ 0.39
VAT1-208ENST00000590924 TTPAP49638 278 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 SEPHS1P49903 392 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 CRYMQ14894 314 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 MRNIPQ6NTE8 343 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 NEPROQ6NW34 567 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 CYS1Q717R9 158 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 SDCCAG8Q86SQ7 713 aaPredicted RBP17.51■□□□□ 0.39
VAT1-208ENST00000590924 AMZ2Q86W34 360 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 SERPINA9Q86WD7 417 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 RELL1Q8IUW5 271 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 PIANPQ8IYJ0 282 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 LRRN4CLQ8ND94 238 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 CALML6Q8TD86 181 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 PYROXD1Q8WU10 500 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 IFT81Q8WYA0 676 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 KLHL6Q8WZ60 621 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 DCUN1D1Q96GG9 259 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 ZDHHC12Q96GR4 267 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 OR6C1Q96RD1 312 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 RHOXF2Q9BQY4 288 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 FAM96AQ9H5X1 160 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 WDR37Q9Y2I8 494 aa17.51■□□□□ 0.39
VAT1-208ENST00000590924 PTPN13Q12923 2485 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 KLHL33A6NCF5 533 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms