RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 USP9YO00507 2555 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-211ENST00000590098 USP9XQ93008 2570 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-211ENST00000590098 MIF4GDA9UHW6 222 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 QSOX1O00391 747 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 PDGFAP04085 211 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 PRSS56P0CW18 603 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 RORAP35398 523 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 CD97P48960 835 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 LMAN1P49257 510 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 ITGA1P56199 1179 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 BOP1Q14137 746 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 DBN1Q16643 649 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 ZNF658BQ4V348 819 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 MICALCLQ6ZW33 695 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 PIANPQ8IYJ0 282 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 SYTL1Q8IYJ3 562 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 N4BP2L2Q92802 583 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 TRAPPC9Q96Q05 1148 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 KLHL25Q9H0H3 589 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 XKR8Q9H6D3 395 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 PCMTD2Q9NV79 361 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 ACTR10Q9NZ32 417 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 TCFL5Q9UL49 500 aa17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 G3BP2Q9UN86 482 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 PCDHGA9Q9Y5G4 932 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-211ENST00000590098 TTLL8A6PVC2 850 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 E7EQ34 232 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 LIN7AO14910 233 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 AP2A1O95782 977 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 FTH1P02794 183 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 HBQ1P09105 142 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 PVRP15151 417 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 MSNP26038 577 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 NSG1P42857 185 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 PTGIRP43119 386 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 KIF5AQ12840 1032 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 ZNF789Q5FWF6 425 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 LCN10Q6JVE6 187 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 LINC00523Q86TU6 105 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 GPR135Q8IZ08 494 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 ADGRF3Q8IZF5 1079 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 TXLNBQ8N3L3 684 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 FAM26EQ8N5C1 309 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 TAB3Q8N5C8 712 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 EFCAB3Q8N7B9 438 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 NRTNQ99748 197 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 DPH2Q9BQC3 489 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 TMEM121Q9BTD3 319 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 PIH1D1Q9NWS0 290 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 PACSIN2Q9UNF0 486 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 ASF1AQ9Y294 204 aa17.38■□□□□ 0.37
PRKCSH-211ENST00000590098 SPTAN1Q13813 2472 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 CCDC78A2IDD5 438 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 CLEC18AA5D8T8 446 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 C9J4A7 227 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 VPS4BO75351 444 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 TMEM63AO94886 807 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 GAS8O95995 478 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 AGXTP21549 392 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 SHMT2P34897 504 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 ITIH4Q14624 930 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 BRD3Q15059 726 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 PTCHD3Q3KNS1 767 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 SYTL3Q4VX76 610 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 SPESP1Q6UW49 350 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 CLEC18BQ6UXF7 455 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 DNAAF3Q8N9W5 541 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 CLEC18CQ8NCF0 446 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 ADAMTS17Q8TE56 1095 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 ELMO1Q92556 727 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 TTC1Q99614 292 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 BAG1Q99933 345 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 POLG2Q9UHN1 485 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 VPS4AQ9UN37 437 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 ICKQ9UPZ9 632 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 R3HDM2Q9Y2K5 976 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 ZNF451Q9Y4E5 1061 aa17.37■□□□□ 0.37
PRKCSH-211ENST00000590098 MROH6A6NGR9 719 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 F8W8V4 182 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 ZNF749O43361 778 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 FTCDO95954 541 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 GDF10P55107 478 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 PLOD1Q02809 727 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 KLF1Q13351 362 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 CCDC38Q502W7 563 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 LYPLAL1Q5VWZ2 237 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 PACS1Q6VY07 963 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 CDHR3Q6ZTQ4 885 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 TBC1D21Q8IYX1 336 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 OR5AR1Q8NGP9 310 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 SLC35B2Q8TB61 432 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 TCTN2Q96GX1 697 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 MLXIPLQ9NP71 852 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 PADI2Q9Y2J8 665 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 TDRKHQ9Y2W6 561 aaKnown RBP17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 PCDHGB7Q9Y5F8 929 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 PRSS21Q9Y6M0 314 aa17.36■□□□□ 0.37
PRKCSH-211ENST00000590098 SPTBN1Q01082 2364 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-211ENST00000590098 CCDC162PA2VCL2 907 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms