RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GNG11P61952 73 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 RPL7AP62424 266 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 PMP22Q01453 160 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 SLC10A7Q0GE19 358 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PTP4A2Q12974 167 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 KRT81Q14533 505 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 SLC9A5Q14940 896 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 TCEAL1Q15170 157 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 BOLA3Q53S33 107 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 ZNF569Q5MCW4 686 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 HENMT1Q5T8I9 393 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 SEL1L2Q5TEA6 688 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 CCDC181Q5TID7 509 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 AGAP9Q5VTM2 703 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 MLIPQ5VWP3 458 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 CRTC3Q6UUV7 619 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 ISLR2Q6UXK2 745 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 C3P1Q6ZMU1 363 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 B4GALNT4Q76KP1 1039 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 C11orf96Q7Z7L8 435 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 CCDC50Q8IVM0 306 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 ARHGAP12Q8IWW6 846 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 CHERPQ8IWX8 916 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 RBM12BQ8IXT5 1001 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 DNAAF3Q8N9W5 541 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 CA5BP1Q8WTZ4 195 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PHF10Q8WUB8 498 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 FAM172AQ8WUF8 416 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PIH1D2Q8WWB5 315 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 CENPIQ92674 756 aaPredicted RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 NTAN1Q96AB6 310 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PTERQ96BW5 349 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 SDCCAG3Q96C92 435 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 MBD6Q96DN6 1003 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 SLC39A8Q9C0K1 460 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 LHPPQ9H008 270 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 ZWILCHQ9H900 591 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 NOD2Q9HC29 1040 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 GPAMQ9HCL2 828 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 SLC22A11Q9NSA0 550 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 GPATCH2LQ9NWQ4 482 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 SOHLH2Q9NX45 425 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 DNAJB12Q9NXW2 375 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 DDX56Q9NY93 547 aaKnown RBP5.89□□□□□ -1.47
VPS25-204ENST00000589577 PLA2G3Q9NZ20 509 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 KCNN3Q9UGI6 736 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PYCARDQ9ULZ3 195 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 NENFQ9UMX5 172 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 DNAJC16Q9Y2G8 782 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 JRKLQ9Y4A0 524 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 HS3ST3B1Q9Y662 390 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 SVEP1Q4LDE5 3571 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
VPS25-204ENST00000589577 PHF3Q92576 2039 aaKnown RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 TRAV17A0A0B4J275 112 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 SLC9B1P1A6NJY1 282 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 RNF212BA8MTL3 300 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 FOXO6A8MYZ6 492 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 PSTPIP1O43586 416 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 HCRTR1O43613 425 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 FZD6O60353 706 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 PRAMEF2O60811 474 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 TOXO94900 526 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 PEX11BO96011 259 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 F10P00742 488 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 KRT1P04264 644 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 PYGLP06737 847 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 CTSBP07858 339 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 MSL3P1P0C860 447 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 ZNF30P17039 623 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 ZNF7P17097 686 aaPredicted RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 MMP11P24347 488 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 CASQ1P31415 396 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 HTR7P34969 479 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 SOX11P35716 441 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 RWDD2BP57060 319 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 RBPJQ06330 500 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 DSG2Q14126 1118 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 IHHQ14623 411 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 RPS6KA1Q15418 735 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 INSCQ1MX18 579 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 KHDC1Q4VXA5 237 aaKnown RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 TMTC4Q5T4D3 741 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 LRRC38Q5VT99 294 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 C1orf189Q5VU69 101 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 KIRREL2Q6UWL6 708 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 WASH2PQ6VEQ5 465 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 USP45Q70EL2 814 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 POLNQ7Z5Q5 900 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 SLFN11Q7Z7L1 901 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 ADGRG6Q86SQ4 1221 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 SPPL2CQ8IUH8 684 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 PSTKQ8IV42 348 aaKnown RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 CIARTQ8N365 385 aaPredicted RBP5.88□□□□□ -1.47
VPS25-204ENST00000589577 MARVELD2Q8N4S9 558 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 NPWQ8N729 165 aa5.88□□□□□ -1.47
VPS25-204ENST00000589577 NIPA2Q8N8Q9 360 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms