RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 LIPJQ5W064 366 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 FAM109BQ6ICB4 259 aaPredicted RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 CES5AQ6NT32 575 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 LETMD1Q6P1Q0 360 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 SERPINA13PQ6UXR4 307 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 RFLNAQ6ZTI6 216 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 SPRED2Q7Z698 418 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 L3MBTL4Q8NA19 623 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 FNDC5Q8NAU1 212 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 OR52B6Q8NGF0 335 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 DNAJB8Q8NHS0 232 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 USP7Q93009 1102 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ZUFSPQ96AP4 578 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ESAMQ96AP7 390 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 SPDL1Q96EA4 605 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 DUS3LQ96G46 650 aaKnown RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 NAF1Q96HR8 494 aaKnown RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 RIPOR3Q96MK2 946 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 FAM129BQ96TA1 746 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ZBTB18Q99592 522 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 TMEM79Q9BSE2 394 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 TRIM15Q9C019 465 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 NKX2-4Q9H2Z4 354 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 FBRSL1Q9HCM7 1045 aaKnown RBP10.17□□□□□ -0.78
VPS25-203ENST00000589520 HPS4Q9NQG7 708 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 DNAJC11Q9NVH1 559 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 ADA2Q9NZK5 511 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 CD84Q9UIB8 345 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 BTRCQ9Y297 605 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 TMED5Q9Y3A6 229 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 GBF1Q92538 1859 aa10.17□□□□□ -0.78
VPS25-203ENST00000589520 KANSL1LA0AUZ9 987 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 SLC5A10A0PJK1 596 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 CCDC154A6NI56 674 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 FADS2P1A8MWK0 482 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 GPR89AB7ZAQ6 455 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 TSPAN6O43657 245 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 AP1G1O43747 822 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 VEGFDO43915 354 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 RNASEH1O60930 286 aaKnown RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 EEDO75530 441 aaKnown RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 KAT7O95251 611 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 BAG2O95816 211 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 GPR89BP0CG08 455 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 PRPS2P11908 318 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 HSD17B1P14061 328 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 ATP6V1C1P21283 382 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 JAK1P23458 1154 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 TEAD1P28347 426 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 MAPK1P28482 360 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 GJA4P35212 333 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 TNFRSF4P43489 277 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 POLR2JP52435 117 aaKnown RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 PNLIPRP1P54315 467 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 SEMG2Q02383 582 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 CEACAM7Q14002 265 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 RCAN2Q14206 197 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 AP5B1Q2VPB7 878 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 SYTL3Q4VX76 610 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 CACHD1Q5VU97 1274 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 TANGO2Q6ICL3 276 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 TMEM220Q6QAJ8 160 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 VITQ6UXI7 678 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 DHDDSQ86SQ9 333 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 DPP10Q8N608 796 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 CXorf40AQ8TE69 158 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 SKA2Q8WVK7 121 aaPredicted RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 POP5Q969H6 163 aaKnown RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 NXPE3Q969Y0 559 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 ARRDC3Q96B67 414 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 CCDC124Q96CT7 223 aaKnown RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 NUS1Q96E22 293 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 ACOX2Q99424 681 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 GPATCH1Q9BRR8 931 aaKnown RBP10.16□□□□□ -0.78
VPS25-203ENST00000589520 EFHD1Q9BUP0 239 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 ACTR8Q9H981 624 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 FBRSQ9HAH7 460 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 TRIM39Q9HCM9 518 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 GPRC5BQ9NZH0 403 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 ABCD2Q9UBJ2 740 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 CD300AQ9UGN4 299 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 MAPRE3Q9UPY8 281 aa10.16□□□□□ -0.78
VPS25-203ENST00000589520 A0A1B0GTL3 188 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 A0A1W2PPC1 479 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 AQP12BA6NM10 295 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 LOC730098B7Z3J9 87 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 E7ENX8 843 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 MANBAO00462 879 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 NR5A2O00482 541 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 ACOT8O14734 319 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 CASQ2O14958 399 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 LSM1O15116 133 aaKnown RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 SGTAO43765 313 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 RSL1D1O76021 490 aaKnown RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 RECQL5O94762 991 aaPredicted RBP10.15□□□□□ -0.78
VPS25-203ENST00000589520 OPRD1P41143 372 aa10.15□□□□□ -0.78
VPS25-203ENST00000589520 MTHFRP42898 656 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms