RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 SIDT1Q9NXL6 827 aaKnown RBP13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 POLG2Q9UHN1 485 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 ITPR1Q14643 2758 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 ZFC3H1O60293 1989 aaKnown RBP13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 H3BMM5 538 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 MATN2O00339 956 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 BTN3A3O00478 584 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 BTN3A1O00481 513 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 KPNA5O15131 536 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 KDM1AO60341 852 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 NIPSNAP2O75323 286 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 GPC4O75487 556 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 BANF1O75531 89 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 ESR1P03372 595 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 F7P08709 466 aaPredicted RBP13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 PGAM1P18669 254 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 CHRM3P20309 590 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 CDH3P22223 829 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 KPNA2P52292 529 aaKnown RBP13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 CTBP1Q13363 440 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 KCNAB1Q14722 419 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 MORF4L2Q15014 288 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 MANEAQ5SRI9 462 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 ARHGAP40Q5TG30 622 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 FBXO38Q6PIJ6 1188 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 CENPUQ71F23 418 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 GPR155Q7Z3F1 870 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 VASH2Q86V25 355 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 DTX1Q86Y01 620 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 DENND6AQ8IWF6 608 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 PDIK1LQ8N165 341 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 OR5K2Q8NHB8 316 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 FAM136AQ96C01 138 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 RNF31Q96EP0 1072 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 SNF8Q96H20 258 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 SLC41A2Q96JW4 573 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 BIRC8Q96P09 236 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 FBXO6Q9NRD1 293 aaPredicted RBP13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 INTS10Q9NVR2 710 aaKnown RBP13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 PLAGL1Q9UM63 463 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 ICKQ9UPZ9 632 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 FAM169AQ9Y6X4 670 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 CACNA1BQ00975 2339 aa13.69□□□□□ -0.22
CLPTM1-210ENST00000589158 URB1O60287 2271 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 EFCAB8A8MWE9 144 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 C2orf74A8MZ97 194 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 E5RI56 91 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 RAD1O60671 282 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 SLCO2B1O94956 709 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 ZBTB11O95625 1053 aaPredicted RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 S1PR4O95977 384 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 RPN2P04844 631 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 EBLN1P0CF75 366 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PKMP14618 531 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PRDX3P30048 256 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 SHMT2P34897 504 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 ITGA8P53708 1063 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 HSD11B2P80365 405 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 VAC14Q08AM6 782 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 IL11RAQ14626 422 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 CRYMQ14894 314 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 MSS51Q4VC12 460 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 HSP90AA5PQ58FG0 334 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 ZNF789Q5FWF6 425 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 HP1BP3Q5SSJ5 553 aaPredicted RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PLEKHS1Q5SXH7 462 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 CYB5D1Q6P9G0 228 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 UNC5AQ6ZN44 842 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 KCNMB4Q86W47 210 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 KMT5CQ86Y97 462 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 RASGRP3Q8IV61 690 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 CACNA2D3Q8IZS8 1091 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 IL22RA1Q8N6P7 574 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 CALML6Q8TD86 181 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 NKD1Q969G9 470 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PWWP2AQ96N64 755 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 NAT9Q9BTE0 207 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 CCDC68Q9H2F9 335 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PDE7BQ9NP56 450 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 TSR3Q9UJK0 312 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 POMT2Q9UKY4 750 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 ACACAQ13085 2346 aa13.68□□□□□ -0.22
CLPTM1-210ENST00000589158 PIPSLA2A3N6 862 aa13.67□□□□□ -0.22
CLPTM1-210ENST00000589158 SLC9B1P1A6NJY1 282 aa13.67□□□□□ -0.22
CLPTM1-210ENST00000589158 SMAPO00193 183 aa13.67□□□□□ -0.22
CLPTM1-210ENST00000589158 STK17BO94768 372 aa13.67□□□□□ -0.22
CLPTM1-210ENST00000589158 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms