RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 OR52A4PA6NMU1 304 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 ZW10O43264 779 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 HYAL3O43820 417 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-208ENST00000588667 ZWINTO95229 277 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 S1PR4O95977 384 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 AHSGP02765 367 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 ESR1P03372 595 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 SLC19A1P41440 591 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 CD151P48509 253 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 HES3Q5TGS1 186 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 SH2D5Q6ZV89 423 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 ZC3HC1Q86WB0 502 aaKnown RBP19.68■□□□□ 0.74
ATG4D-208ENST00000588667 TMPRSS12Q86WS5 348 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 ANKRD42Q8N9B4 389 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 CXorf40BQ96DE9 158 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 APOPT1Q96IL0 206 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 BIRC8Q96P09 236 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 WASF3Q9UPY6 502 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 CRYL1Q9Y2S2 319 aa19.68■□□□□ 0.74
ATG4D-208ENST00000588667 H3BMM5 538 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 VIPP01282 170 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 CCNFP41002 786 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 SERPINB8P50452 374 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 GNGT1P63211 74 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 MPP1Q00013 466 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 PLOD1Q02809 727 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-208ENST00000588667 BOP1Q14137 746 aaKnown RBP19.67■□□□□ 0.74
ATG4D-208ENST00000588667 RPE65Q16518 533 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 CTSL3PQ5NE16 218 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 TMPRSS7Q7RTY8 843 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 Q8N9G6 341 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-208ENST00000588667 RMDN2Q96LZ7 410 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 SLC38A3Q99624 504 aa19.67■□□□□ 0.74
ATG4D-208ENST00000588667 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-208ENST00000588667 IQCF5A8MTL0 148 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 NTN3O00634 580 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 COPEO14579 308 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 TM9SF1O15321 606 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 SHOX2O60902 331 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 ALDOAP04075 364 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 RPLP0P05388 317 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 MTHFD1P11586 935 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 LEPRP48357 1165 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 MPP2Q14168 576 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 SYTL3Q4VX76 610 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 ZNF789Q5FWF6 425 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 CDCP2Q5VXM1 449 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 CAPRIN2Q6IMN6 1127 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 RBM12BQ8IXT5 1001 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 SPDYE1Q8NFV5 336 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 LKAAEAR1Q8TD35 194 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 ISL2Q96A47 359 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 ATXN7L3BQ96GX2 97 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 C12orf66Q96MD2 445 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 GPR22Q99680 433 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 IQCGQ9H095 443 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 OR52A5Q9H2C5 316 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 LRRN3Q9H3W5 708 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 UCK1Q9HA47 277 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 FBXO6Q9NRD1 293 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 IMP3Q9NV31 184 aaKnown RBP19.66■□□□□ 0.74
ATG4D-208ENST00000588667 MKS1Q9NXB0 559 aa19.66■□□□□ 0.74
ATG4D-208ENST00000588667 A0A1W2PQM1 296 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 SLC5A10A0PJK1 596 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 LILRA5A6NI73 299 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 ITGB6P18564 788 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 GABRB3P28472 473 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 TYK2P29597 1187 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 ALDH4A1P30038 563 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 FMO4P31512 558 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CCR7P32248 378 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 PREPP48147 710 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CCT5P48643 541 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CCL7P80098 99 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 SPIDRQ14159 915 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 TTC19Q6DKK2 380 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CACTIN-AS1Q8N1I8 211 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 MGARPQ8TDB4 240 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 DYDC1Q8WWB3 177 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 TMEM159Q96B96 161 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CABS1Q96KC9 395 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 INSM2Q96T92 566 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 SYNDIG1Q9H7V2 258 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 SLC40A1Q9NP59 571 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 KCNK4Q9NYG8 393 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CLCA2Q9UQC9 943 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 MTO1Q9Y2Z2 717 aaKnown RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 IFRD1O00458 451 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 TOP3BO95985 862 aaKnown RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 APOA4P06727 396 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 PKMP14618 531 aaKnown RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 AOAHP28039 575 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 PDHA2P29803 388 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 RPA3P35244 121 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 EPHA4P54764 986 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CLDN6P56747 220 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 OR1D5P58170 312 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 GPLD1P80108 840 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 TMEM26Q6ZUK4 368 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 PDZD3Q86UT5 571 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms