RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 UNC5DQ6UXZ4 953 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 CDHR3Q6ZTQ4 885 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 FRA10AC1Q70Z53 315 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 TRIM48Q8IWZ4 208 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 MINDY1Q8N5J2 469 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 CCDC63Q8NA47 563 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 ASB11Q8WXH4 323 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 GPR78Q96P69 363 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 MRPL57Q9BQC6 102 aaKnown RBP13.78□□□□□ -0.2
CCDC130-208ENST00000588071 SELENOSQ9BQE4 189 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 DUSP23Q9BVJ7 150 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 PARVBQ9HBI1 364 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 SEMA4GQ9NTN9 838 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
CCDC130-208ENST00000588071 ADAMTS6Q9UKP5 1117 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 IKZF3Q9UKT9 509 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 PLLPQ9Y342 182 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 USP34Q70CQ2 3546 aa13.78□□□□□ -0.2
CCDC130-208ENST00000588071 KIR2DS5A0A0G2JLQ3 304 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 A0A0G2JNG1 304 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 LNP1A1A4G5 178 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 CCDC189A1A4V9 331 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 GFYI3L273 518 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 KIR2DS3K7RE56 304 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 LRP3O75074 770 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.21
CCDC130-208ENST00000588071 C1orf105O95561 183 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 VIPP01282 170 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 ALPPL2P10696 532 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 MTHFD1P11586 935 aaKnown RBP13.77□□□□□ -0.21
CCDC130-208ENST00000588071 RPIAP49247 311 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 SP140Q13342 867 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 KIR2DS5Q14953 304 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 SF3A2Q15428 464 aaKnown RBP13.77□□□□□ -0.21
CCDC130-208ENST00000588071 OR4D1Q15615 310 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 CSRP2Q16527 193 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 CCDC153Q494R4 210 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 SLC9B2Q86UD5 537 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 GPSM1Q86YR5 675 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 TBC1D21Q8IYX1 336 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 NAGSQ8N159 534 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 RHEBL1Q8TAI7 183 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 MAPK15Q8TD08 544 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 EXT2Q93063 718 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 PTERQ96BW5 349 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 SLC12A9Q9BXP2 914 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 MKS1Q9NXB0 559 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 CPSF2Q9P2I0 782 aaKnown RBP13.77□□□□□ -0.21
CCDC130-208ENST00000588071 ZNF624Q9P2J8 865 aaPredicted RBP13.77□□□□□ -0.21
CCDC130-208ENST00000588071 TDRKHQ9Y2W6 561 aaKnown RBP13.77□□□□□ -0.21
CCDC130-208ENST00000588071 BPTFQ12830 3046 aa13.77□□□□□ -0.21
CCDC130-208ENST00000588071 A6NCN8 305 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 SYCE1LA8MT33 242 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 SUPT3HB4E1H0 165 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 PRPF4O43172 522 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 TYROBPO43914 113 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 SUPT3HO75486 399 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 ZWINTO95229 277 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 S100BP04271 92 aaPredicted RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 ENO2P09104 434 aaPredicted RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 XRCC1P18887 633 aaPredicted RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 TAC1P20366 129 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 NDUFS1P28331 727 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 RPA3P35244 121 aaPredicted RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 SLC19A1P41440 591 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 BDKRB1P46663 353 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 PRKG2Q13237 762 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 TECRLQ5HYJ1 363 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 DUS1LQ6P1R4 473 aaKnown RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 SBSNQ6UWP8 590 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 OR5K2Q8NHB8 316 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 RAD51AP1Q96B01 352 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 FAM111AQ96PZ2 611 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 MRPL46Q9H2W6 279 aaKnown RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 STN1Q9H668 368 aaKnown RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 UTP6Q9NYH9 597 aaKnown RBP13.76□□□□□ -0.21
CCDC130-208ENST00000588071 NKIRAS1Q9NYS0 192 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 NLGN3Q9NZ94 848 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 CD274Q9NZQ7 290 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 XPR1Q9UBH6 696 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 CPNE7Q9UBL6 633 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 PDE10AQ9Y233 779 aa13.76□□□□□ -0.21
CCDC130-208ENST00000588071 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
CCDC130-208ENST00000588071 NCF1BA6NI72 391 aaPredicted RBP13.75□□□□□ -0.21
CCDC130-208ENST00000588071 NCF1CA8MVU1 366 aaPredicted RBP13.75□□□□□ -0.21
CCDC130-208ENST00000588071 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
CCDC130-208ENST00000588071 TM9SF1O15321 606 aa13.75□□□□□ -0.21
CCDC130-208ENST00000588071 PCDHGA12O60330 932 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms