RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 ECHS1P30084 290 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CCKBRP32239 447 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CSF2RBP32927 897 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 ABCG1P45844 678 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CLCN7P51798 805 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 GPX6P59796 221 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 ABRQ12979 859 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 PRKG2Q13237 762 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 SQSTM1Q13501 440 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 TRA2AQ13595 282 aaKnown RBP eCLIP11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 KBTBD12Q3ZCT8 623 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 HECTD2Q5U5R9 776 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 IRGCQ6NXR0 463 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 TMEM71Q6P5X7 295 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 ZNF549Q6P9A3 640 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 XKR5Q6UX68 686 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 NEK10Q6ZWH5 1172 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 VRK3Q8IV63 474 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 MYO1HQ8N1T3 1032 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 EIF1ADQ8N9N8 165 aaKnown RBP11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 LRRN4CLQ8ND94 238 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 OR52E1Q8NGJ3 308 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CD200R1Q8TD46 325 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 LIN37Q96GY3 246 aaPredicted RBP11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CCDC74BQ96LY2 380 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 TGM7Q96PF1 710 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CYTH2Q99418 400 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CMKLR1Q99788 373 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 NINJ2Q9NZG7 142 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 SLC39A10Q9ULF5 831 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 CDYLQ9Y232 598 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 DHRS7Q9Y394 339 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 PSAT1Q9Y617 370 aa11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 MN1Q10571 1320 aaPredicted RBP11.56□□□□□ -0.56
SDHDP1-201ENST00000588055 ASXL3Q9C0F0 2248 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 PRAMEF33A0A0G2JMD5 474 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 OR6C74A6NCV1 312 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 HGSO14964 777 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 CAPN5O15484 640 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 TOP3BO95985 862 aaKnown RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 JMJD7P0C870 316 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 THRAP10827 490 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 CD9P21926 228 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 CSTF2P33240 577 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 SPRP35270 261 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 LIMK2P53671 638 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 IL2P60568 153 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 GBX1Q14549 363 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 UAP1Q16222 522 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 KYNUQ16719 465 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 KLHL38Q2WGJ6 581 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 ACSBG2Q5FVE4 666 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 C3orf38Q5JPI3 329 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 SNAP47Q5SQN1 464 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 RBM20Q5T481 1227 aaKnown RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 CCNI2Q6ZMN8 369 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 ZC3HC1Q86WB0 502 aaKnown RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 AMIGO1Q86WK6 493 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 SLITRK4Q8IW52 837 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 CPNE9Q8IYJ1 553 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 PHC3Q8NDX5 983 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 OR4E2Q8NGC2 313 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 WDR36Q8NI36 951 aaKnown RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 JPH3Q8WXH2 748 aaPredicted RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 UBXN4Q92575 508 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 RSC1A1Q92681 617 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 RAD51AP1Q96B01 352 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 CD180Q99467 661 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 RBBP8Q99708 897 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 TFB2MQ9H5Q4 396 aaKnown RBP11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 HRASLS2Q9NWW9 162 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 KLHL3Q9UH77 587 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 VWA7Q9Y334 891 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 ENTPD2Q9Y5L3 495 aa11.55□□□□□ -0.56
SDHDP1-201ENST00000588055 IGHV5-10-1A0A0J9YXX1 117 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 ZNF839A8K0R7 811 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 C2orf74A8MZ97 194 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 TOX3O15405 576 aaPredicted RBP11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 MAP3K7O43318 606 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 INHBAP08476 426 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 MPC1LP0DKB6 136 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 CYP2A7P20853 494 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 FDXRP22570 491 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 GABRB3P28472 473 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 TNFRSF8P28908 595 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 BDKRB1P46663 353 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 ARL4DP49703 201 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 RAB28P51157 221 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 PDX1P52945 283 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 PMS2P54278 862 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 CDKN2DP55273 166 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 GABREP78334 506 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 POU4F1Q01851 419 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 SP140Q13342 867 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 GRTP1Q5TC63 336 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 CYB5D1Q6P9G0 228 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms