RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 FERD3LQ96RJ6 166 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 CCM2Q9BSQ5 444 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 HGH1Q9BTY7 390 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 DHRS4Q9BTZ2 278 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 GBA3Q9H227 469 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 GOLPH3Q9H4A6 298 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 DEF6Q9H4E7 631 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 DDX56Q9NY93 547 aaKnown RBP11.49□□□□□ -0.57
BRCA1-225ENST00000586385 SPHK1Q9NYA1 384 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 DHCR7Q9UBM7 475 aaKnown RBP11.49□□□□□ -0.57
BRCA1-225ENST00000586385 SERTAD3Q9UJW9 196 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 PTRH2Q9Y3E5 179 aaKnown RBP11.49□□□□□ -0.57
BRCA1-225ENST00000586385 HEBP2Q9Y5Z4 205 aa11.49□□□□□ -0.57
BRCA1-225ENST00000586385 CROCCQ5TZA2 2017 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 hCG_1818297A0A087WSY0 165 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 C17orf113A0A1B0GUU1 675 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 ALOX12BO75342 701 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 PYGMP11217 842 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 POU3F2P20265 443 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 GCGRP47871 477 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 PRKG2Q13237 762 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 TFDP2Q14188 446 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 KRT33BQ14525 404 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 SLC9A5Q14940 896 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 TCEAL1Q15170 157 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 MLIPQ5VWP3 458 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 SPESP1Q6UW49 350 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 AMIGO1Q86WK6 493 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 C19orf47Q8N9M1 422 aaKnown RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 OR2Y1Q8NGV0 311 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 UBE2Q2Q8WVN8 375 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 RBM41Q96IZ5 413 aaKnown RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 OR2A14Q96R47 310 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 VAT1Q99536 393 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 FSD1LQ9BXM9 530 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 RSPH14Q9UHP6 348 aa11.48□□□□□ -0.57
BRCA1-225ENST00000586385 G3BP2Q9UN86 482 aaKnown RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 COPG1Q9Y678 874 aaKnown RBP11.48□□□□□ -0.57
BRCA1-225ENST00000586385 CSMD1Q96PZ7 3565 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 TRBV5-4A0A0C4DH59 114 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 C5orf60A6NFR6 353 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 C2orf74A8MZ97 194 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 OR2B3O76000 313 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 HBQ1P09105 142 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 ATP1B2P14415 290 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-225ENST00000586385 UGT2B7P16662 529 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 AGXTP21549 392 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 RBL1P28749 1068 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 PEBP1P30086 187 aaKnown RBP11.47□□□□□ -0.57
BRCA1-225ENST00000586385 SLC1A1P43005 524 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 CD151P48509 253 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 TMPRSS15P98073 1019 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 SARM1Q6SZW1 724 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
BRCA1-225ENST00000586385 KCNMB4Q86W47 210 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 RHOT2Q8IXI1 618 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 OR5AR1Q8NGP9 310 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 P3H4Q92791 437 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 FER1L6-AS2Q96M78 137 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 IP6K3Q96PC2 410 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 COPS8Q99627 209 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 ILKAPQ9H0C8 392 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-225ENST00000586385 MVB12BQ9H7P6 319 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 CRLS1Q9UJA2 301 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 TRHDEQ9UKU6 1024 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 PADI2Q9Y2J8 665 aa11.47□□□□□ -0.57
BRCA1-225ENST00000586385 SYCE3A1L190 88 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 C2orf81A6NN90 581 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 PSTPIP1O43586 416 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 AKR1B10O60218 316 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 PSMB4P28070 264 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ACADLP28330 430 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 FOLR3P41439 243 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 GLRBP48167 497 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 GEMP55040 296 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 DCDP81605 110 aaKnown RBP11.46□□□□□ -0.57
BRCA1-225ENST00000586385 HIF1AQ16665 826 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 NKAIN1Q4KMZ8 207 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 LYPLAL1Q5VWZ2 237 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 IGFL2Q6UWQ7 119 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 SNX20Q7Z614 316 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 FAM20CQ8IXL6 584 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 KLHDC8BQ8IXV7 354 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 PIANPQ8IYJ0 282 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 DNAJC22Q8N4W6 341 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ZNF655Q8N720 491 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-225ENST00000586385 CLEC1AQ8NC01 280 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ST6GALNAC3Q8NDV1 305 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 OR8K1Q8NGG5 319 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 PROKR1Q8TCW9 393 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 TFGQ92734 400 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms