RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 PSME3P61289 254 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 EMX2Q04743 252 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 NAIF1Q69YI7 327 aaPredicted RBP13.87□□□□□ -0.19
LIG3-205ENST00000585941 TMEM220Q6QAJ8 160 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 Q6ZSR9 355 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 FUNDC1Q8IVP5 155 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 CHPFQ8IZ52 775 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 SLC22A15Q8IZD6 547 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 ST13P5Q8NFI4 369 aaPredicted RBP13.87□□□□□ -0.19
LIG3-205ENST00000585941 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 GID8Q9NWU2 228 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 GPR34Q9UPC5 381 aa13.87□□□□□ -0.19
LIG3-205ENST00000585941 C17orf113A0A1B0GUU1 675 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 FBP2O00757 339 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 INPP4BO15327 924 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 CFLARO15519 480 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 SYNCRIPO60506 623 aaKnown RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 ULK1O75385 1050 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 C5AR1P21730 350 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 KCNK10P57789 538 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 CNTN1Q12860 1018 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 BLOC1S3Q6QNY0 202 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 TRIM46Q7Z4K8 759 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 ADGRG6Q86SQ4 1221 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 GALNT13Q8IUC8 556 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 FNDC5Q8NAU1 212 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 OR2T11Q8NH01 316 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 CSGALNACT1Q8TDX6 532 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 CCDC124Q96CT7 223 aaKnown RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 CHFRQ96EP1 664 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 LINC00615Q96LM1 132 aaPredicted RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 CCDC138Q96M89 665 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 P2RY13Q9BPV8 354 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 HOPXQ9BPY8 73 aaPredicted RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 ACTR8Q9H981 624 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 FBRSQ9HAH7 460 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 DNAJC11Q9NVH1 559 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 HCN2Q9UL51 889 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 C15orf41Q9Y2V0 281 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 COQ6Q9Y2Z9 468 aa13.86□□□□□ -0.19
LIG3-205ENST00000585941 ZFC3H1O60293 1989 aaKnown RBP13.86□□□□□ -0.19
LIG3-205ENST00000585941 GRXCR2A6NFK2 248 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 LOC730098B7Z3J9 87 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 NR5A2O00482 541 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 TRIM38O00635 465 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 LSM1O15116 133 aaKnown RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 UGDHO60701 494 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SLC22A3O75751 556 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 VHLP40337 213 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 PTDSS1P48651 473 aaKnown RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 ZNF33BQ06732 778 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 FOXM1Q08050 763 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 NR6A1Q15406 480 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 CST6Q15828 149 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SPATS1Q496A3 300 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 TCHHL1Q5QJ38 904 aaPredicted RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 ZNF648Q5T619 568 aaPredicted RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 PIP5KL1Q5T9C9 394 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 ADAMTSL4Q6UY14 1074 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 MBOAT1Q6ZNC8 495 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 KLHDC8AQ8IYD2 350 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 TDHQ8IZJ6 230 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 ZNF513Q8N8E2 541 aaPredicted RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 DCBLD1Q8N8Z6 715 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 FBXO15Q8NCQ5 510 aaPredicted RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 OR9I1Q8NGQ6 314 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 HIC2Q96JB3 615 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 S100A14Q9HCY8 104 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 EPS15L1Q9UBC2 864 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 GIMAP2Q9UG22 337 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SNX6Q9UNH7 406 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 PCDHGA7Q9Y5G6 932 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 A0A1W2PP18 115 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 FAM234BA2RU67 622 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 H3BM21 787 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 MANBAO00462 879 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 TBX10O75333 385 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 NPPAP01160 153 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 ANPEPP15144 967 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 HTR6P50406 440 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 THOP1P52888 689 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 DIO3P55073 304 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 CCNIQ14094 377 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 RCAN2Q14206 197 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 ABRAXAS2Q15018 415 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 AGERQ15109 404 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SAMD4BQ5PRF9 694 aaKnown RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 SWT1Q5T5J6 900 aaKnown RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 C8orf82Q6P1X6 216 aaPredicted RBP13.85□□□□□ -0.19
LIG3-205ENST00000585941 SCIMPQ6UWF3 145 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 SFRP1Q8N474 314 aa13.85□□□□□ -0.19
LIG3-205ENST00000585941 L3MBTL4Q8NA19 623 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms