RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
SDF2-202ENST00000585428 SARM1Q6SZW1 724 aa14□□□□□ -0.17
SDF2-202ENST00000585428 VSTM4Q8IW00 320 aa14□□□□□ -0.17
SDF2-202ENST00000585428 TFGQ92734 400 aaPredicted RBP14□□□□□ -0.17
SDF2-202ENST00000585428 RBM41Q96IZ5 413 aaKnown RBP14□□□□□ -0.17
SDF2-202ENST00000585428 RANBP9Q96S59 729 aa14□□□□□ -0.17
SDF2-202ENST00000585428 APOL2Q9BQE5 337 aa14□□□□□ -0.17
SDF2-202ENST00000585428 SLC29A3Q9BZD2 475 aa14□□□□□ -0.17
SDF2-202ENST00000585428 SPRTNQ9H040 489 aaPredicted RBP14□□□□□ -0.17
SDF2-202ENST00000585428 GOLPH3Q9H4A6 298 aa14□□□□□ -0.17
SDF2-202ENST00000585428 XKR8Q9H6D3 395 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ZNF552Q9H707 407 aaPredicted RBP14□□□□□ -0.17
SDF2-202ENST00000585428 ASF1BQ9NVP2 202 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ZDHHC3Q9NYG2 299 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ACTR10Q9NZ32 417 aa14□□□□□ -0.17
SDF2-202ENST00000585428 CRLS1Q9UJA2 301 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ERRFI1Q9UJM3 462 aaPredicted RBP14□□□□□ -0.17
SDF2-202ENST00000585428 B3GNT3Q9Y2A9 372 aa14□□□□□ -0.17
SDF2-202ENST00000585428 AP1M2Q9Y6Q5 423 aa14□□□□□ -0.17
SDF2-202ENST00000585428 CELSR2Q9HCU4 2923 aa14□□□□□ -0.17
SDF2-202ENST00000585428 PCSK5Q92824 1860 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 UNC79Q9P2D8 2635 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 SHANK1Q9Y566 2161 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 CFAP99D6REC4 459 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 H7C0C1 242 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 IFRD1O00458 451 aaPredicted RBP13.99□□□□□ -0.17
SDF2-202ENST00000585428 MFAP3LO75121 409 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 CD63P08962 238 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 TPBGLP0DKB5 382 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 COL8A1P27658 744 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 ATP5OP48047 213 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 MARCKSL1P49006 195 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 TMPRSS15P98073 1019 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 PRKG2Q13237 762 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 RAPSNQ13702 412 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 NR6A1Q15406 480 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 ZIC1Q15915 447 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 DCAF10Q5QP82 559 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 ITPRIPL1Q6GPH6 555 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 RHBDD2Q6NTF9 364 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 SPESP1Q6UW49 350 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 MAMDC2Q7Z304 686 aaPredicted RBP13.99□□□□□ -0.17
SDF2-202ENST00000585428 MRGPREQ86SM8 312 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 RAB43Q86YS6 212 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 KLHDC8BQ8IXV7 354 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 CISD2Q8N5K1 135 aaKnown RBP13.99□□□□□ -0.17
SDF2-202ENST00000585428 FLVCR1-AS1Q8TAF5 88 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 KRT35Q92764 455 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 FER1L6-AS2Q96M78 137 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 GBP5Q96PP8 586 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 OR2A14Q96R47 310 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 ANP32EQ9BTT0 268 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 SLC7A5P2Q9GIP4 190 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 EFR3BQ9Y2G0 817 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 PADI2Q9Y2J8 665 aa13.99□□□□□ -0.17
SDF2-202ENST00000585428 C9J4A7 227 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 H7C0S8 307 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 CCL22O00626 93 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 CBFA2T2O43439 604 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 IGHEP01854 428 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 CTSBP07858 339 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 GSTM1P09488 218 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 ITGALP20701 1170 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 ACRV1P26436 265 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 PSMB4P28070 264 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 ACADLP28330 430 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 OTX2P32243 289 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 COPS2P61201 443 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 DCDP81605 110 aaKnown RBP13.98□□□□□ -0.17
SDF2-202ENST00000585428 GSTM4Q03013 218 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 MYBPC3Q14896 1274 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 MLIPQ5VWP3 458 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 ZNF787Q6DD87 383 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 GPR135Q8IZ08 494 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 IQCKQ8N0W5 287 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 GALNT16Q8N428 558 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 CLDN19Q8N6F1 224 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 ACTL9Q8TC94 416 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.98□□□□□ -0.17
SDF2-202ENST00000585428 PTERQ96BW5 349 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 C17orf62Q9BQA9 187 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 MAP10Q9P2G4 905 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 ICKQ9UPZ9 632 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 NOTCH2Q04721 2471 aa13.98□□□□□ -0.17
SDF2-202ENST00000585428 CNOT3O75175 753 aaKnown RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 OR2B3O76000 313 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 TPM1P09493 284 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 MC4RP32245 332 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 DCTP40126 519 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 MAGEA1P43355 309 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 TBX2Q13207 712 aaPredicted RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 PRPSAP1Q14558 356 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 MRPL14Q6P1L8 145 aaKnown RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 ZNF449Q6P9G9 518 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 MICALCLQ6ZW33 695 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 SERPINA9Q86WD7 417 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 PIANPQ8IYJ0 282 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms