RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SHCBP1LQ9BZQ2 653 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 DNMT3AQ9Y6K1 912 aaPredicted RBP10.18□□□□□ -0.78
LIG3-203ENST00000585370 ABCA7Q8IZY2 2146 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 EML5Q05BV3 1969 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 MUC22E2RYF6 1773 aaPredicted RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 B2RBV5 119 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 E2F3O00716 465 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 UBFD1O14562 309 aaKnown RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 TM4SF5O14894 197 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 MMP20O60882 483 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 OTCP00480 354 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ENO1P06733 434 aaKnown RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 ZNF806P0C7X5 589 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 PCSK2P16519 638 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 TIE1P35590 1138 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RPIAP49247 311 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ATP4BP51164 291 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 CDH13P55290 713 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 BTKQ06187 659 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 HSPA14Q0VDF9 509 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 KLF10Q13118 480 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 HERC3Q15034 1050 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 SF3A2Q15428 464 aaKnown RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 MAPRE2Q15555 327 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 PDCD2Q16342 344 aaPredicted RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 PLA2G2CQ5R387 149 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 PIP5KL1Q5T9C9 394 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 KANK2Q63ZY3 851 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 NXNQ6DKJ4 435 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RAET1GQ6H3X3 334 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 KIAA1161Q6NSJ0 714 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 NEK5Q6P3R8 708 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 TMEM220Q6QAJ8 160 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RNF165Q6ZSG1 346 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 GPRIN3Q6ZVF9 776 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 CHSY3Q70JA7 882 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 UBE2R2Q712K3 238 aaPredicted RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 SFTPA1Q8IWL2 248 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 HDDC3Q8N4P3 179 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 TEX9Q8N6V9 391 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RASGEF1AQ8N9B8 481 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RPLP0P6Q8NHW5 317 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RP9Q8TA86 221 aaKnown RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 AGR3Q8TD06 166 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 AGAP11Q8TF27 550 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ATL1Q8WXF7 558 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ASB12Q8WXK4 309 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ELMO1Q92556 727 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 GLMNQ92990 594 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 FAM131CQ96AQ9 280 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 TMEM159Q96B96 161 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 RHBDF1Q96CC6 855 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 MOCOSQ96EN8 888 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 HIC2Q96JB3 615 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ZC3H10Q96K80 434 aaKnown RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 LINC00615Q96LM1 132 aaPredicted RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 FOPNLQ96NB1 174 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 HHIPQ96QV1 700 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 OR52B2Q96RD2 323 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 C1QTNF7Q9BXJ2 289 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 CD244Q9BZW8 370 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 WDR55Q9H6Y2 383 aaPredicted RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 SLC40A1Q9NP59 571 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 CNOT6Q9ULM6 557 aaKnown RBP10.17□□□□□ -0.78
LIG3-203ENST00000585370 ITM2BQ9Y287 266 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 ANGPTL3Q9Y5C1 460 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 USP24Q9UPU5 2620 aa10.17□□□□□ -0.78
LIG3-203ENST00000585370 SLC5A10A0PJK1 596 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 ANTXRLA6NF34 631 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 NCF1BA6NI72 391 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 NCF1CA8MVU1 366 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 E9PBE3 544 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 K7EPI3 171 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 UBDO15205 165 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 MID1O15344 667 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SGTAO43765 313 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 FOXD2O60548 495 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 KLHL41O60662 606 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 KATNA1O75449 491 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 STK16O75716 305 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RASSF9O75901 435 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 EPN2O95208 641 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 MATN4O95460 622 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 DNTTP04053 509 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 NCF1P14598 390 aaPredicted RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 MAP4P27816 1152 aaKnown RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 EPHA3P29320 983 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 DRD3P35462 400 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 METAP1P53582 386 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 COPAP53621 1224 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 LIMK1P53667 647 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RPS14P62263 151 aaKnown RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 RPS21P63220 83 aaKnown RBP10.16□□□□□ -0.78
LIG3-203ENST00000585370 GRIK2Q13002 908 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RIPK1Q13546 671 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 GTF2H2Q13888 395 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 SQLEQ14534 574 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 NAA25Q14CX7 972 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 RBBP7Q16576 425 aa10.16□□□□□ -0.78
LIG3-203ENST00000585370 MAP7D1Q3KQU3 841 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms