RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CNDP2Q96KP4 475 aaKnown RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 SLC27A5Q9Y2P5 690 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 FKBP7Q9Y680 259 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 SMIM28A0A1B0GU29 152 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 ISPDA4D126 451 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 CYP3A5P20815 502 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 IL10RBQ08334 325 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 ATXN7L2Q5T6C5 722 aaPredicted RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 XKRXQ6PP77 449 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 EFHD2Q96C19 240 aaPredicted RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 PKP2Q99959 881 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 DUSP26Q9BV47 211 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 TOR3AQ9H497 397 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 IFT46Q9NQC8 304 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 CCDC177Q9NQR7 707 aaPredicted RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 DTLQ9NZJ0 730 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 KANTRA0A1W2PQU2 76 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 CACNB4O00305 520 aaPredicted RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 BCAS2O75934 225 aaPredicted RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 HMGN1P05114 100 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 TACR2P21452 398 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 SLC1A2P43004 574 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 MAGEA2P43356 314 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
RNF43-208ENST00000584437 SDHAF4Q5VUM1 108 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 ZNF773Q6PK81 442 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 CLIP4Q8N3C7 705 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 ZNF615Q8N8J6 731 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 OR10H4Q8NGA5 316 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 ATG10Q9H0Y0 220 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 C14orf105Q9NVL8 296 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 MALT1Q9UDY8 824 aa12.84□□□□□ -0.35
RNF43-208ENST00000584437 DAPL1A0PJW8 107 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 FAM159BA6NKW6 160 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 CDK14O94921 469 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 KELP23276 732 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 CDH15P55291 814 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 AP1S1P61966 158 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 IKBKEQ14164 716 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 DPYSL2Q16555 572 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.35
RNF43-208ENST00000584437 TATDN1Q6P1N9 297 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 SLC9A6Q92581 669 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 ZNF639Q9UID6 485 aa12.83□□□□□ -0.35
RNF43-208ENST00000584437 SMIM35A0A1B0GVV1 85 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 PRAMEF12O95522 483 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 ARL2P36404 184 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 TSPAN5P62079 268 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 SLC18A2Q05940 514 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 SYT16Q17RD7 645 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 ZNF404Q494X3 552 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 PCDHGB1Q9Y5G3 927 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 OR2AT4A6NND4 320 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 INSIG1O15503 277 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 PRPS1L1P21108 318 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 KHKP50053 298 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 TARDBPQ13148 414 aaKnown RBP eCLIP12.83□□□□□ -0.36
RNF43-208ENST00000584437 ZNF460Q14592 562 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 TAF1AQ15573 450 aaPredicted RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 GALNT12Q8IXK2 581 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 SAMD14Q8IZD0 417 aaPredicted RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 CFAP52Q8N1V2 620 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 LPPQ93052 612 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 CGREF1Q99674 301 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 GNB5O14775 395 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 ABCB7O75027 752 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 INMTO95050 263 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 C1RP00736 705 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 IGFALSP35858 605 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 POM121L1PQ3SYA9 428 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 PDE12Q6L8Q7 609 aaKnown RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 BRINP2Q9C0B6 783 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 FARSBQ9NSD9 589 aaKnown RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 I3L521 148 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 J3QRK9 145 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 PQBP1O60828 265 aaKnown RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 KDM4BO94953 1096 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 SRPRAP08240 638 aaKnown RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 PIK3CBP42338 1070 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 DEFA5Q01523 94 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 TMEM198Q66K66 360 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 OR2T5Q6IEZ7 315 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 ZNF548Q8NEK5 533 aaPredicted RBP12.83□□□□□ -0.36
RNF43-208ENST00000584437 OR2T29Q8NH02 315 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 TFAP2BQ92481 460 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 FBXL8Q96CD0 374 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 SLC35G5Q96KT7 338 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 C5orf34Q96MH7 638 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 PRKAB1Q9Y478 270 aa12.83□□□□□ -0.36
RNF43-208ENST00000584437 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
RNF43-208ENST00000584437 K7EPI3 171 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms