RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 HEBP2Q9Y5Z4 205 aa10.85□□□□□ -0.67
CCDC47-206ENST00000584112 PKD1L1Q8TDX9 2849 aa10.85□□□□□ -0.67
CCDC47-206ENST00000584112 PSMD3O43242 534 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 NELFEP18615 380 aaKnown RBP10.84□□□□□ -0.67
CCDC47-206ENST00000584112 NDUFS1P28331 727 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 CDC25BP30305 580 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 STAT5AP42229 794 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 PRLHRP49683 370 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 MSLNQ13421 630 aaPredicted RBP10.84□□□□□ -0.67
CCDC47-206ENST00000584112 GPR33Q49SQ1 333 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 OOSP2Q86WS3 158 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 KMT5CQ86Y97 462 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 TGIF2LYQ8IUE0 185 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 TMEM139Q8IV31 216 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 NXPE1Q8N323 547 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 HM13Q8TCT9 377 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 UBE2Q2Q8WVN8 375 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 STAMBPL1Q96FJ0 436 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 C12orf66Q96MD2 445 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 COPS8Q99627 209 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 CCM2Q9BSQ5 444 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 TRIM55Q9BYV6 548 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 WWP1Q9H0M0 922 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 SEMA5BQ9P283 1151 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 COPG2Q9UBF2 871 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 CROTQ9UKG9 612 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 NEU2Q9Y3R4 380 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 RPS6KL1Q9Y6S9 549 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 COLEC10Q9Y6Z7 277 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 FER1L5A0AVI2 2057 aa10.84□□□□□ -0.67
CCDC47-206ENST00000584112 C17orf113A0A1B0GUU1 675 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 GOLGA6L3A6NEY3 463 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 TLCD2A6NGC4 264 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 H7C0S8 307 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 DDX3YO15523 660 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 LDB2O43679 373 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 KIF1CO43896 1103 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 FTCDO95954 541 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 MT-ND3P03897 115 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 FGF5P12034 268 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ATP1B2P14415 290 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 CAPN3P20807 821 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 MC4RP32245 332 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ARL4DP49703 201 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SH3BP2P78314 561 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 TMPRSS15P98073 1019 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ACY1Q03154 408 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 KLF1Q13351 362 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SPARCL1Q14515 664 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 KRT33BQ14525 404 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 CRTC2Q53ET0 693 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 DNTTIP2Q5QJE6 756 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SEL1L2Q5TEA6 688 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 TMEM198Q66K66 360 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 KCTD11Q693B1 232 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ARMC6Q6NXE6 501 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 JMJD6Q6NYC1 403 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ZNF449Q6P9G9 518 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 C6orf15Q6UXA7 325 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 LINC00523Q86TU6 105 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 PPP1R3BQ86XI6 285 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 CARFQ8N187 725 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 RNF10Q8N5U6 811 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 FAM71DQ8N9W8 422 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SIDT2Q8NBJ9 832 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SNRNP40Q96DI7 357 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SLC41A2Q96JW4 573 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ALS2CR12Q96Q35 445 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 INSM2Q96T92 566 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SMR3AQ99954 134 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 DESI2Q9BSY9 194 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 TSGA10Q9BZW7 698 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 KIR3DX1Q9H7L2 352 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 SLAMF7Q9NQ25 335 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 NLE1Q9NVX2 485 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 ZDHHC3Q9NYG2 299 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 FAM8A1Q9UBU6 413 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 LNPEPQ9UIQ6 1025 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 RARRES3Q9UL19 164 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 PACSIN2Q9UNF0 486 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 PCDHB3Q9Y5E6 796 aa10.83□□□□□ -0.68
CCDC47-206ENST00000584112 CFAP20Q9Y6A4 193 aaKnown RBP10.83□□□□□ -0.68
CCDC47-206ENST00000584112 IGLV3-16A0A075B6K0 115 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 IGHV5-51A0A0C4DH38 117 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 TRBV5-4A0A0C4DH59 114 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 UBA6A0AVT1 1052 aaPredicted RBP10.82□□□□□ -0.68
CCDC47-206ENST00000584112 OR5K3A6NET4 321 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 ERI2A8K979 691 aaKnown RBP10.82□□□□□ -0.68
CCDC47-206ENST00000584112 MATN2O00339 956 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 SPAG6O75602 509 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 KIAA0754O94854 1291 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 AP2A1O95782 977 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 GAS8O95995 478 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 GSTM1P09488 218 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 CCNYL3P0C7X3 344 aa10.82□□□□□ -0.68
CCDC47-206ENST00000584112 ZNF28P17035 718 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms