RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NELFBQ8WX92 580 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 ESR2Q92731 530 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 HTRA1Q92743 480 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 ZNF583Q96ND8 569 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 TSGA10Q9BZW7 698 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 MAGEF1Q9HAY2 307 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 SMYD2Q9NRG4 433 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 BCORQ6W2J9 1755 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 TNS3Q68CZ2 1445 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 DOCK2Q92608 1830 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 ABCB11O95342 1321 aa3.93□□□□□ -1.78
SMCHD1-208ENST00000583344 LRP5O75197 1615 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 AHDC1Q5TGY3 1603 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 COL22A1Q8NFW1 1626 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 BICDL2A1A5D9 508 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 VGLL3A8MV65 326 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 PRKAB2O43741 272 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 USO1O60763 962 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 TACC1O75410 805 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 TCP1P17987 556 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CASP1P29466 404 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 USP8P40818 1118 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 FNTAP49354 379 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 DCAF7P61962 342 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 PITX1P78337 314 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 UBE3AQ05086 875 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SLC12A1Q13621 1099 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 NAA25Q14CX7 972 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CTF1Q16619 201 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 EIF2S3LQ2VIR3 472 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SBK1Q52WX2 424 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 KCNT1Q5JUK3 1230 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CCDC122Q5T0U0 273 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CFAP58Q5T655 872 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 C1QTNF12Q5T7M4 302 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 MFSD4BQ5TF39 518 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CENPPQ6IPU0 288 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 KLHL10Q6JEL2 608 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 TTI2Q6NXR4 508 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 ARHGAP11AQ6P4F7 1023 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 EMBQ6PCB8 327 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 TMTC3Q6ZXV5 915 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 BRINP3Q76B58 766 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 ANKRD23Q86SG2 305 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 MYPOPQ86VE0 399 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 IQCA1Q86XH1 822 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CPOQ8IVL8 374 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 FAM114A1Q8IWE2 563 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CHERPQ8IWX8 916 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 DSELQ8IZU8 1212 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SRBD1Q8N5C6 995 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SPATA4Q8NEY3 305 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 DBF4BQ8NFT6 615 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 TRIM58Q8NG06 486 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 FAM76AQ8TAV0 307 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 HERVK_113Q902F9 699 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SYN2Q92777 582 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 JAKMIP2Q96AA8 810 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SH3KBP1Q96B97 665 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 RRP36Q96EU6 259 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 AK8Q96MA6 479 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 RIOK1Q9BRS2 568 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 UBAC1Q9BSL1 405 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CRACR2AQ9BSW2 395 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 RBM4Q9BWF3 364 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 CAPS2Q9BXY5 557 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 ESRP2Q9H6T0 727 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 NHEJ1Q9H9Q4 299 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 PREBQ9HCU5 417 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 GDF3Q9NR23 364 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 KRT84Q9NSB2 600 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 EXOC1Q9NV70 894 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 NSMCE4AQ9NXX6 385 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 TAB2Q9NYJ8 693 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 GUCA1BQ9UMX6 200 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 SNX12Q9UMY4 172 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 GPR34Q9UPC5 381 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 DCCP43146 1447 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 ARAP2Q8WZ64 1704 aa3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 MYO5AQ9Y4I1 1855 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-208ENST00000583344 DLEC1Q9Y238 1755 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 A0A087X0M5 115 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 PVALEFA0A1B0GWK0 134 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 A0A1B0GX30 115 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 A0A1W2PPH5 198 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 SYNDIG1LA6NDD5 238 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 LILRA5A6NI73 299 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 BTNL10A8MVZ5 291 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 B4DLN1 442 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 PSMA7O14818 248 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 EIF3HO15372 352 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 KLK10O43240 276 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 IPO7O95373 1038 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 FGFR1OPO95684 399 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 PRSS1P07477 247 aa3.91□□□□□ -1.78
SMCHD1-208ENST00000583344 CYC1P08574 325 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms