RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 NPY2RP49146 381 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 KPNA2P52292 529 aaKnown RBP9.44□□□□□ -0.9
TOP3A-211ENST00000581536 ACVR1Q04771 509 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 COL9A2Q14055 689 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-211ENST00000581536 KRT33BQ14525 404 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 PLCL1Q15111 1095 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 LINC00303Q3SY05 128 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 PCID2Q5JVF3 399 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 ANKRD22Q5VYY1 191 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 CEACAM20Q6UY09 585 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 CACNA2D3Q8IZS8 1091 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 KRT222Q8N1A0 295 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 MPP5Q8N3R9 675 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 EXD3Q8N9H8 876 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 LMNTD1Q8N9Z9 388 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 HM13Q8TCT9 377 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 LKAAEAR1Q8TD35 194 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 HEXDCQ8WVB3 486 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 MAIP1Q8WWC4 291 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 MAGOHBQ96A72 148 aaKnown RBP9.44□□□□□ -0.9
TOP3A-211ENST00000581536 ZDHHC12Q96GR4 267 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 PBKQ96KB5 322 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 TRIM56Q9BRZ2 755 aaKnown RBP9.44□□□□□ -0.9
TOP3A-211ENST00000581536 ASPSCR1Q9BZE9 553 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 RAB33BQ9H082 229 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 XKR8Q9H6D3 395 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 AKIRIN1Q9H9L7 192 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-211ENST00000581536 SYBUQ9NX95 663 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 JRKLQ9Y4A0 524 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 COLEC10Q9Y6Z7 277 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 SEC16AO15027 2179 aa9.44□□□□□ -0.9
TOP3A-211ENST00000581536 SLC5A10A0PJK1 596 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 OR5K3A6NET4 321 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 GOLGA8KD6RF30 607 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 GOLGA8TH3BQL2 631 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 CD3EAPO15446 510 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 NKX2-8O15522 239 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 NRDCO43847 1150 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 AP2A2O94973 939 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 TIAF1O95411 115 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 F7P08709 466 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ANKRD34CP0C6C1 535 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 EBLN1P0CF75 366 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 NELFEP18615 380 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 F8A1P23610 371 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 CD82P27701 267 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ACADLP28330 430 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 CCR7P32248 378 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 COILP38432 576 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 NSG1P42857 185 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 GPS1Q13098 491 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ELOAQ14241 798 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 KCNJ11Q14654 390 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 FASTKD1Q53R41 847 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 TAF1BQ53T94 588 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 LRRC8BQ6P9F7 803 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 PRSS42Q7Z5A4 293 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 CAND1Q86VP6 1230 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 VRK3Q8IV63 474 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ZNF295-AS1Q8N0V1 137 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 PPHLN1Q8NEY8 458 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 OR5AR1Q8NGP9 310 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ZFPM2Q8WW38 1151 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ELMO1Q92556 727 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 TFGQ92734 400 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 EXTL1Q92935 676 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 MFSD3Q96ES6 412 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 OSBPL9Q96SU4 736 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 SLC12A9Q9BXP2 914 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 KLHL25Q9H0H3 589 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 KIR3DX1Q9H7L2 352 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 TREX1Q9NSU2 369 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 SEMA5BQ9P283 1151 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 IL17BQ9UHF5 180 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 RIMKLBQ9ULI2 386 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 NEU2Q9Y3R4 380 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 TMEM184BQ9Y519 407 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 MRPS18BQ9Y676 258 aaKnown RBP9.43□□□□□ -0.9
TOP3A-211ENST00000581536 ATRXP46100 2492 aa9.43□□□□□ -0.9
TOP3A-211ENST00000581536 UBA6A0AVT1 1052 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 SLC9B1P1A6NJY1 282 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 GOLGA8MH3BSY2 632 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 BTN3A1O00481 513 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 TOX3O15405 576 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 SPAG6O75602 509 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 KIAA0754O94854 1291 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 DLGAP3O95886 979 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 NTRK1P04629 796 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 OR56A5P0C7T3 313 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 FGF5P12034 268 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 TPSB2P20231 275 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 ARNTP27540 789 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PRDX3P30048 256 aaKnown RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 CD151P48509 253 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PRAMEP78395 509 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 RHDQ02161 417 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 ABRQ12979 859 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms