RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CCDC78A2IDD5 438 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 OR51F1A6NGY5 319 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 PYCARD-AS1I3L0S3 204 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ARHGAP6O43182 974 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 KDM1AO60341 852 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 FURINP09958 794 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 OR56A5P0C7T3 313 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ACADLP28330 430 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 SHMT2P34897 504 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 PPARGP37231 505 aaPredicted RBP11.19□□□□□ -0.62
SSH2-208ENST00000579040 TLE1Q04724 770 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 GPS2Q13227 327 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 RPS6KA1Q15418 735 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 UGT8Q16880 541 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 CCDC38Q502W7 563 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 MEI1Q5TIA1 1274 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 IZUMO3Q5VZ72 239 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 TCTN3Q6NUS6 607 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 FBXO38Q6PIJ6 1188 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 PTRH1Q86Y79 214 aaKnown RBP11.19□□□□□ -0.62
SSH2-208ENST00000579040 APLFQ8IW19 511 aaPredicted RBP11.19□□□□□ -0.62
SSH2-208ENST00000579040 TBC1D21Q8IYX1 336 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ADGRF3Q8IZF5 1079 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 CCDC89Q8N998 374 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 PHC3Q8NDX5 983 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 THAP4Q8WY91 577 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ELMO1Q92556 727 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 MR1Q95460 341 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 HDAC10Q969S8 669 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 TLR10Q9BXR5 811 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ACTR10Q9NZ32 417 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ASF1AQ9Y294 204 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 MAN2B2Q9Y2E5 1009 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 ZKSCAN5Q9Y2L8 839 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 PRSS21Q9Y6M0 314 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 CCDC88CQ9P219 2028 aa11.19□□□□□ -0.62
SSH2-208ENST00000579040 SLC5A10A0PJK1 596 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 RAB40ALP0C0E4 278 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 ST6GAL1P15907 406 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 CYP2A7P20853 494 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 PRAMEP78395 509 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 ABRQ12979 859 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 PRKG2Q13237 762 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 CCNG2Q16589 344 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 SYTL3Q4VX76 610 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 AARS2Q5JTZ9 985 aaKnown RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 FAM199XQ6PEV8 388 aaPredicted RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 DRICH1Q6PGQ1 229 aaPredicted RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 SPESP1Q6UW49 350 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 ZNF662Q6ZS27 426 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 MICALCLQ6ZW33 695 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 HOOK3Q86VS8 718 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 DSELQ8IZU8 1212 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 OR5AR1Q8NGP9 310 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 OR4L1Q8NH43 312 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 OR5K2Q8NHB8 316 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 MAIP1Q8WWC4 291 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 C1orf54Q8WWF1 131 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 TRAPPC9Q96Q05 1148 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 DPH2Q9BQC3 489 aaPredicted RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 TSSK1BQ9BXA7 367 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 CHRNA10Q9GZZ6 450 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 EPN3Q9H201 632 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 AKIRIN1Q9H9L7 192 aaPredicted RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 ZNF71Q9NQZ8 489 aaPredicted RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 EIF2B3Q9NR50 452 aaKnown RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 OR6C2Q9NZP2 312 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 SERTAD3Q9UJW9 196 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 ICKQ9UPZ9 632 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 FARSAQ9Y285 508 aaKnown RBP11.18□□□□□ -0.62
SSH2-208ENST00000579040 TP53TG5Q9Y2B4 290 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 TCAF1Q9Y4C2 921 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 PTPN13Q12923 2485 aa11.18□□□□□ -0.62
SSH2-208ENST00000579040 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
SSH2-208ENST00000579040 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
SSH2-208ENST00000579040 AP3B1O00203 1094 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 MEN1O00255 615 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 APRTP07741 180 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 HBQ1P09105 142 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 RORAP35398 523 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 GRIA1P42261 906 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 ITGA1P56199 1179 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 KLRB1Q12918 225 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 SNX1Q13596 522 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
SSH2-208ENST00000579040 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
SSH2-208ENST00000579040 ZNF789Q5FWF6 425 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 PLEKHS1Q5SXH7 462 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 TMEM135Q86UB9 458 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 C19orf47Q8N9M1 422 aaKnown RBP11.17□□□□□ -0.62
SSH2-208ENST00000579040 SLC38A9Q8NBW4 561 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 PPHLN1Q8NEY8 458 aaKnown RBP11.17□□□□□ -0.62
SSH2-208ENST00000579040 OR6P1Q8NGX9 317 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 OR1L3Q8NH93 324 aa11.17□□□□□ -0.62
SSH2-208ENST00000579040 CLIP3Q96DZ5 547 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms