RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NLRP9Q7RTR0 991 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TMPRSS7Q7RTY8 843 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PCGF5Q86SE9 256 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GALNT7Q86SF2 657 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GLRX5Q86SX6 157 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 LDB1Q86U70 411 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SERPINA9Q86WD7 417 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GATAD2AQ86YP4 633 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PHYKPLQ8IUZ5 450 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 DENND6AQ8IWF6 608 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GSPT2Q8IYD1 628 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 NAGSQ8N159 534 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 LILRA3Q8N6C8 439 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CLDN19Q8N6F1 224 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CEP112Q8N8E3 955 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 EIF1ADQ8N9N8 165 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 DNAAF3Q8N9W5 541 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 LINC01356Q8N9X3 169 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FBXO36Q8NEA4 188 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ACVR1CQ8NER5 493 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PPHLN1Q8NEY8 458 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR156Q8NFN8 814 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 OR4L1Q8NH43 312 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF398Q8TD17 642 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GLMNQ92990 594 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF669Q96BR6 464 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 STAMBPL1Q96FJ0 436 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CERS2Q96G23 380 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CAMK1GQ96NX5 476 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TIMM29Q9BSF4 260 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SPATA16Q9BXB7 569 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 C1QTNF7Q9BXJ2 289 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM129AQ9BZQ8 928 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 RAB17Q9H0T7 212 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TMEM168Q9H0V1 697 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 OR2AG1Q9H205 316 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM96AQ9H5X1 160 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GAREM1Q9H706 876 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ASB8Q9H765 288 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 EPB41L5Q9HCM4 733 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PHPT1Q9NRX4 125 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SPATS2LQ9NUQ6 558 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TRNAU1APQ9NX07 287 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 DLL3Q9NYJ7 618 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 EURLQ9NYK6 297 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 NINJ2Q9NZG7 142 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 BFARQ9NZS9 450 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 NCDNQ9UBB6 729 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GALPQ9UBC7 116 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FOXD3Q9UJU5 478 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ANAPC5Q9UJX4 755 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GMEB2Q9UKD1 530 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 APPL1Q9UKG1 709 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 WASF3Q9UPY6 502 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CHMP2BQ9UQN3 213 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 WDR37Q9Y2I8 494 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TMEM98Q9Y2Y6 226 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PKP3Q9Y446 797 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PRKAB1Q9Y478 270 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CSNK1G3Q9Y6M4 447 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 RPS6KL1Q9Y6S9 549 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FRYQ5TBA9 3013 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CEP295Q9C0D2 2601 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 NCOR2Q9Y618 2525 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PRAMEF33A0A0G2JMD5 474 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 TCRBV9S1A1TA0A576 114 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC5A10A0PJK1 596 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MAGEB16A2A368 324 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 FITM1A5D6W6 292 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 C4orf47A7E2U8 309 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 IQCF5A8MTL0 148 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 LMO7DNF2Z398 122 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CACNB4O00305 520 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 TPP1O14773 563 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 YY2O15391 372 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CD3EAPO15446 510 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 AQP9O43315 295 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 GRID2O43424 1007 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 DFNA5O60443 496 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MAGEC1O60732 1142 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SDC3O75056 442 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 GPC4O75487 556 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PIAS1O75925 651 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC25A14O95258 325 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RASGRP1O95267 797 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CER1O95813 267 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 TSPAN12O95859 305 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SYPP08247 313 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RHOXF2BP0C7M4 288 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ERVK-10P10266 1014 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MYF5P13349 255 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ITGALP20701 1170 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CSRP1P21291 193 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 AK4P27144 223 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ACADLP28330 430 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CCR7P32248 378 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MAGEA4P43358 317 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ABCG1P45844 678 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 LEPRP48357 1165 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CCT8P50990 548 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms