RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 HMGB1P1B2RPK0 211 aaPredicted RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 UBXN8O00124 270 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 FFAR2O15552 330 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 AQP9O43315 295 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 NOBOXO60393 691 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 ADRB1P08588 477 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 CBSLP0DN79 551 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 MYF5P13349 255 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 ENO3P13929 434 aaPredicted RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 MTHFD2P13995 350 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 CTSEP14091 401 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 ENGP17813 658 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 CBSP35520 551 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 ETV4P43268 484 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 RXRGP48443 463 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 MAZP56270 477 aaKnown RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 WDR4P57081 412 aaKnown RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 ILF3Q12906 894 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTC1-205ENST00000578537 PCLAFQ15004 111 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 FBXO48Q5FWF7 155 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 CES4AQ5XG92 561 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 NEK10Q6ZWH5 1172 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 TAF8Q7Z7C8 310 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 MYO1HQ8N1T3 1032 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 NKAPQ8N5F7 415 aaKnown RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 PDLIM5Q96HC4 596 aaKnown RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 CABS1Q96KC9 395 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 C12orf66Q96MD2 445 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 FAM111AQ96PZ2 611 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 SMC6Q96SB8 1091 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 SELENOSQ9BQE4 189 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 MECRQ9BV79 373 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 GSDMCQ9BYG8 508 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 GAREM1Q9H706 876 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 SYTL2Q9HCH5 934 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 SENP1Q9P0U3 644 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
CTC1-205ENST00000578537 PCOLCE2Q9UKZ9 415 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 PDE10AQ9Y233 779 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 ASB1Q9Y576 335 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 PCDHGA5Q9Y5G8 931 aa12.62□□□□□ -0.39
CTC1-205ENST00000578537 B4DGG1 531 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 G3V2L1 256 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 GFYI3L273 518 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 EIF3FO00303 357 aaPredicted RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 ARHGAP33O14559 1287 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 KPNA5O15131 536 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 CASC3O15234 703 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 YY2O15391 372 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 PRPF4O43172 522 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTC1-205ENST00000578537 PSIP1O75475 530 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 C1orf105O95561 183 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 SLC35G4P0C7Q5 338 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 COL6A2P12110 1019 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 F3P13726 295 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 IDSP22304 550 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 TGM1P22735 817 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 SLC26A3P40879 764 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 SLC19A1P41440 591 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 RGS4P49798 205 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 HNRNPKP61978 463 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTC1-205ENST00000578537 RPA4Q13156 261 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 RPE65Q16518 533 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 UAP1L1Q3KQV9 507 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 AGAP9Q5VTM2 703 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 ABRAXAS1Q6UWZ7 409 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 UBE2R2Q712K3 238 aaPredicted RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 MINDY1Q8N5J2 469 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 KYQ8NBH2 561 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 SLC37A2Q8TED4 501 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 SAP25Q8TEE9 199 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 SKA2Q8WVK7 121 aaPredicted RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 ASB11Q8WXH4 323 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 KIAA1191Q96A73 305 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 MOCOSQ96EN8 888 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 SCYL1Q96KG9 808 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 IL17FQ96PD4 163 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 HGH1Q9BTY7 390 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 DPEP2Q9H4A9 486 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 TFB2MQ9H5Q4 396 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 SSU72Q9NP77 194 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 IMP3Q9NV31 184 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 UTP6Q9NYH9 597 aaKnown RBP12.61□□□□□ -0.39
CTC1-205ENST00000578537 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 RAB23Q9ULC3 237 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 PLLPQ9Y342 182 aa12.61□□□□□ -0.39
CTC1-205ENST00000578537 COL5A1P20908 1838 aaPredicted RBP12.6□□□□□ -0.39
CTC1-205ENST00000578537 HEATR5BQ9P2D3 2071 aa12.6□□□□□ -0.39
CTC1-205ENST00000578537 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
CTC1-205ENST00000578537 LMO7DNF2Z398 122 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms