RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 NAT9Q9BTE0 207 aa13.57□□□□□ -0.24
GGA3-203ENST00000577435 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
GGA3-203ENST00000577435 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
GGA3-203ENST00000577435 C1GALT1Q9NS00 363 aa13.57□□□□□ -0.24
GGA3-203ENST00000577435 INTS10Q9NVR2 710 aaKnown RBP13.57□□□□□ -0.24
GGA3-203ENST00000577435 PILRAQ9UKJ1 303 aa13.57□□□□□ -0.24
GGA3-203ENST00000577435 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
GGA3-203ENST00000577435 TMEM184BQ9Y519 407 aaPredicted RBP13.57□□□□□ -0.24
GGA3-203ENST00000577435 FAM169AQ9Y6X4 670 aa13.57□□□□□ -0.24
GGA3-203ENST00000577435 PCM1Q15154 2024 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 UBA6A0AVT1 1052 aaPredicted RBP13.56□□□□□ -0.24
GGA3-203ENST00000577435 GOLGA8KD6RF30 607 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 GOLGA8TH3BQL2 631 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 BTN3A3O00478 584 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 SNRNP200O75643 2136 aaKnown RBP13.56□□□□□ -0.24
GGA3-203ENST00000577435 S1PR4O95977 384 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 ESR1P03372 595 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 TPBGLP0DKB5 382 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 FGF5P12034 268 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 ITGB6P18564 788 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 POLR2CP19387 275 aaPredicted RBP13.56□□□□□ -0.24
GGA3-203ENST00000577435 KPNA2P52292 529 aaKnown RBP13.56□□□□□ -0.24
GGA3-203ENST00000577435 SH3BP2P78314 561 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 HSD11B2P80365 405 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 HSPA14Q0VDF9 509 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 PRKG2Q13237 762 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 MORF4L2Q15014 288 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 LONRF1Q17RB8 773 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 CTSL3PQ5NE16 218 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 PLEKHS1Q5SXH7 462 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 IZUMO3Q5VZ72 239 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 CYB5D1Q6P9G0 228 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 CCDC81Q6ZN84 652 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 AMIGO1Q86WK6 493 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 VRK3Q8IV63 474 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 ADGRF3Q8IZF5 1079 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 KRT222Q8N1A0 295 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 OTUD6BQ8N6M0 293 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 CALML6Q8TD86 181 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 CTRCQ99895 268 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 TRIM56Q9BRZ2 755 aaKnown RBP13.56□□□□□ -0.24
GGA3-203ENST00000577435 CPNE5Q9HCH3 593 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 BTRCQ9Y297 605 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 MAD1L1Q9Y6D9 718 aa13.56□□□□□ -0.24
GGA3-203ENST00000577435 ATMQ13315 3056 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 TEX51A0A1B0GUA7 166 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 KDM1AO60341 852 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 ZBTB11O95625 1053 aaPredicted RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 TTC4O95801 387 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 DLGAP3O95886 979 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 PGAM1P18669 254 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 MAP4P27816 1152 aaKnown RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 PRDX3P30048 256 aaKnown RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 FMO4P31512 558 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 SHMT2P34897 504 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 EIF3BP55884 814 aaKnown RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 CXADRP78310 365 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 ACY1Q03154 408 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 FOXM1Q08050 763 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 CBLBQ13191 982 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 THOC5Q13769 683 aaKnown RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 MAP7Q14244 749 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 GBX1Q14549 363 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 TMED2Q15363 201 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
GGA3-203ENST00000577435 UNC5DQ6UXZ4 953 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 UNC5AQ6ZN44 842 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 OTOAQ7RTW8 1153 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 SIDT2Q8NBJ9 832 aaKnown RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 STAMBPL1Q96FJ0 436 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 EBNA1BP2Q99848 306 aaKnown RBP13.55□□□□□ -0.24
GGA3-203ENST00000577435 HGH1Q9BTY7 390 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 PITPNM3Q9BZ71 974 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 OR6C2Q9NZP2 312 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 ICKQ9UPZ9 632 aa13.55□□□□□ -0.24
GGA3-203ENST00000577435 C2orf74A8MZ97 194 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 BTN3A1O00481 513 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 TTI1O43156 1089 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 RAD1O60671 282 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 RPN2P04844 631 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 MSL3P1P0C860 447 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 PKMP14618 531 aaKnown RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 FOLR1P15328 257 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 ATP5DP30049 168 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 CASQ1P31415 396 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 CSE1LP55060 971 aaKnown RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 KYNUQ16719 465 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 MSS51Q4VC12 460 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 MANEAQ5SRI9 462 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 ARHGAP40Q5TG30 622 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 HIBCHQ6NVY1 386 aaPredicted RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 CACNA2D3Q8IZS8 1091 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 NLGN4XQ8N0W4 816 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms