RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 KMT5CQ86Y97 462 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 CACNA2D3Q8IZS8 1091 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 BMPERQ8N8U9 685 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMG6-220ENST00000576218 LKAAEAR1Q8TD35 194 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 CALML6Q8TD86 181 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 KIAA1143Q96AT1 154 aaPredicted RBP14.83□□□□□ -0.04
SMG6-220ENST00000576218 FOPNLQ96NB1 174 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 KRT12Q99456 494 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 TRIM56Q9BRZ2 755 aaKnown RBP14.83□□□□□ -0.04
SMG6-220ENST00000576218 FAM167BQ9BTA0 163 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 FANCEQ9HB96 536 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 APMAPQ9HDC9 416 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 LNPEPQ9UIQ6 1025 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 TSR3Q9UJK0 312 aaKnown RBP14.83□□□□□ -0.04
SMG6-220ENST00000576218 RARRES3Q9UL19 164 aa14.83□□□□□ -0.04
SMG6-220ENST00000576218 IGHV5-51A0A0C4DH38 117 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 BTN3A1O00481 513 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 NDC80O14777 642 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 TTI1O43156 1089 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 RAD1O60671 282 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 STK17BO94768 372 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 USP1O94782 785 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 ZBTB11O95625 1053 aaPredicted RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 ESR1P03372 595 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 NELFEP18615 380 aaKnown RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 ARNTP27540 789 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 KPNA2P52292 529 aaKnown RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 HSD11B2P80365 405 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 ACY1Q03154 408 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 ABRQ12979 859 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 TYSND1Q2T9J0 566 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 SYT10Q6XYQ8 523 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 PPP1R3BQ86XI6 285 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 CILP2Q8IUL8 1156 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 SLC22A15Q8IZD6 547 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 PDIK1LQ8N165 341 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 RAB42Q8N4Z0 105 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 OR5K2Q8NHB8 316 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 LPGAT1Q92604 370 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 N4BP2L2Q92802 583 aaPredicted RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 FAM136AQ96C01 138 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 RNF31Q96EP0 1072 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 SNF8Q96H20 258 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 TRIM51Q9BSJ1 452 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 P2RY12Q9H244 342 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 TFB2MQ9H5Q4 396 aaKnown RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 INTS10Q9NVR2 710 aaKnown RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 SIDT1Q9NXL6 827 aaKnown RBP14.82□□□□□ -0.04
SMG6-220ENST00000576218 PLAGL1Q9UM63 463 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
SMG6-220ENST00000576218 FAM208BQ5VWN6 2430 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 PIPSLA2A3N6 862 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 EFCAB8A8MWE9 144 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
SMG6-220ENST00000576218 SMAPO00193 183 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 EBLN1P0CF75 366 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 AOAHP28039 575 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 PTGIRP43119 386 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 DHX9Q08211 1270 aaKnown RBP14.81□□□□□ -0.04
SMG6-220ENST00000576218 IL11RAQ14626 422 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 KCNAB1Q14722 419 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 MORF4L2Q15014 288 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 TMEM135Q86UB9 458 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 KCNMB4Q86W47 210 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 DCUN1D3Q8IWE4 304 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 LMNTD2Q8IXW0 634 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 NLGN4XQ8N0W4 816 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 CARFQ8N187 725 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 NLGN4YQ8NFZ3 816 aaPredicted RBP14.81□□□□□ -0.04
SMG6-220ENST00000576218 KLHL6Q8WZ60 621 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 NAT9Q9BTE0 207 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 PRORYQ9H606 182 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 PPANQ9NQ55 473 aaKnown RBP14.81□□□□□ -0.04
SMG6-220ENST00000576218 FBXO6Q9NRD1 293 aaPredicted RBP14.81□□□□□ -0.04
SMG6-220ENST00000576218 POMT2Q9UKY4 750 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 SLC39A10Q9ULF5 831 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 CELSR3Q9NYQ7 3312 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 AHCTF1Q8WYP5 2266 aa14.81□□□□□ -0.04
SMG6-220ENST00000576218 TEX51A0A1B0GUA7 166 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 ISM1B1AKI9 464 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 BTN3A3O00478 584 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 NIPSNAP2O75323 286 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 KIAA0754O94854 1291 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 TTC4O95801 387 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 PKMP14618 531 aaKnown RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 MAP4P27816 1152 aaKnown RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 ACADLP28330 430 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 SLC1A2P43004 574 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 MAGEA3P43357 314 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 ITGA8P53708 1063 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 ARL4CP56559 192 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 ETF1P62495 437 aaKnown RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 CTBP1Q13363 440 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 CRYMQ14894 314 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 HIF1AQ16665 826 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 TTLL9Q3SXZ7 439 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 TAF1BQ53T94 588 aaPredicted RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 CTSL3PQ5NE16 218 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms