RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CNSTQ6PJW8 725 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 USP53Q70EK8 1073 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 ZNF761Q86XN6 746 aaPredicted RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 PLXDC1Q8IUK5 500 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 SLC22A15Q8IZD6 547 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 ACVR1CQ8NER5 493 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 SPDYE1Q8NFV5 336 aaPredicted RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 OR4D9Q8NGE8 314 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 LKAAEAR1Q8TD35 194 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 NCSTNQ92542 709 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 NXPE2Q96DL1 559 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 CRELD1Q96HD1 420 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 FOPNLQ96NB1 174 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 FMO2Q99518 471 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 RHOXF2Q9BQY4 288 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 AARSD1Q9BTE6 412 aaKnown RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 TBC1D10AQ9BXI6 508 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 TRIT1Q9H3H1 467 aaKnown RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 PLAC1Q9HBJ0 212 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 TAS2R13Q9NYV9 303 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHD3-216ENST00000573936 ATXN7L1Q9ULK2 861 aaPredicted RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 ASF1AQ9Y294 204 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 DHRS7Q9Y394 339 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 V9GYY5 206 aaPredicted RBP10.75□□□□□ -0.69
CHD3-216ENST00000573936 PTPRQQ9UMZ3 2332 aa10.75□□□□□ -0.69
CHD3-216ENST00000573936 NIPSNAP2O75323 286 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 VPS26AO75436 327 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 CBSLP0DN79 551 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 CD9P21926 228 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 SSTR1P30872 391 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 STX2P32856 288 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 PHBP35232 272 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 CBSP35520 551 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 LIMK2P53671 638 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 CSE1LP55060 971 aaKnown RBP10.74□□□□□ -0.69
CHD3-216ENST00000573936 EIF3IQ13347 325 aaKnown RBP10.74□□□□□ -0.69
CHD3-216ENST00000573936 NKAIN2Q5VXU1 208 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 UNC5DQ6UXZ4 953 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 NAPRTQ6XQN6 538 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 NEK10Q6ZWH5 1172 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 OOSP2Q86WS3 158 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 RELL1Q8IUW5 271 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 ZBTB2Q8N680 514 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 PHC3Q8NDX5 983 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 OR5K2Q8NHB8 316 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 MAGEC3Q8TD91 643 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 INPP5DQ92835 1189 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 ZDHHC12Q96GR4 267 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 LIN37Q96GY3 246 aaPredicted RBP10.74□□□□□ -0.69
CHD3-216ENST00000573936 C9orf72Q96LT7 481 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 NRSN2Q9GZP1 204 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 RAB33BQ9H082 229 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 TFB2MQ9H5Q4 396 aaKnown RBP10.74□□□□□ -0.69
CHD3-216ENST00000573936 ANKZF1Q9H8Y5 726 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 TXNDC16Q9P2K2 825 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 EPHA6Q9UF33 1036 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 SLC24A2Q9UI40 661 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 CDYLQ9Y232 598 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 ENTPD2Q9Y5L3 495 aa10.74□□□□□ -0.69
CHD3-216ENST00000573936 CCDC187A0A096LP49 1063 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 PRAMEF33A0A0G2JMD5 474 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 EIF3FO00303 357 aaPredicted RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 MATN2O00339 956 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 ATXN7O15265 892 aaPredicted RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 MPC1LP0DKB6 136 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 ENO3P13929 434 aaPredicted RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 TYRP1P17643 537 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 GABRB3P28472 473 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 CCNFP41002 786 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 CLCN7P51798 805 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 ABRQ12979 859 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 PRKAA1Q13131 559 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 NAB1Q13506 487 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 GBX1Q14549 363 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 NAA30Q147X3 362 aaPredicted RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 SLMAPQ14BN4 828 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 ERCC6LQ2NKX8 1250 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 PHF19Q5T6S3 580 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 LRRC8EQ6NSJ5 796 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 FAM45BPQ6NSW5 357 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 DUS1LQ6P1R4 473 aaKnown RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 ZNF549Q6P9A3 640 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 CAPN12Q6ZSI9 719 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 STRA8Q7Z7C7 330 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 SLITRK4Q8IW52 837 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 LSMEM2Q8N112 164 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 FAM45AQ8TCE6 357 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 SKA2Q8WVK7 121 aaPredicted RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 LCN9Q8WX39 176 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 UBXN4Q92575 508 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 CMKLR1Q99788 373 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 NUDT22Q9BRQ3 303 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 SRMSQ9H3Y6 488 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 RDH14Q9HBH5 336 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 LRRC4CQ9HCJ2 640 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 PDP2Q9P2J9 529 aa10.73□□□□□ -0.69
CHD3-216ENST00000573936 TRMT6Q9UJA5 497 aaKnown RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 VWA7Q9Y334 891 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms