RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 LYPLAL1Q5VWZ2 237 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 PACS1Q6VY07 963 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 NAPRTQ6XQN6 538 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 PRUNE1Q86TP1 453 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 AMIGO1Q86WK6 493 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 OTUD6BQ8N6M0 293 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 OR13J1Q8NGT2 312 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 OR4L1Q8NH43 312 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 OR8K5Q8NH50 307 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 CPT1BQ92523 772 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 ZNF501Q96CX3 271 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 CLIP3Q96DZ5 547 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 TSSK1BQ9BXA7 367 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 PRSS21Q9Y6M0 314 aa9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-212ENST00000573328 NUP210LQ5VU65 1888 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 PCM1Q15154 2024 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 MKRN2OSH3BPM6 223 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 BTN3A3O00478 584 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 SUV39H1O43463 412 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 OR1I1O60431 355 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 RFPL1O75677 317 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 SUN1O94901 812 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 WISP1O95388 367 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 FURINP09958 794 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 PVRP15151 417 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ST6GAL1P15907 406 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 PRDX3P30048 256 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 SHMT2P34897 504 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 GRIA1P42261 906 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 SESN2P58004 480 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 TLE1Q04724 770 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 GPS2Q13227 327 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 SEMA5AQ13591 1074 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 AARS2Q5JTZ9 985 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 NLRP9Q7RTR0 991 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 TMEM135Q86UB9 458 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 GPR135Q8IZ08 494 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 GLIS1Q8NBF1 620 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 UBE2Q2Q8WVN8 375 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 SEC14L1Q92503 715 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 RANBP9Q96S59 729 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 RUFY1Q96T51 708 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 NRTNQ99748 197 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 TFB2MQ9H5Q4 396 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ACTR5Q9H9F9 607 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 CASS4Q9NQ75 786 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 CATSPERZQ9NTU4 200 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ACTR10Q9NZ32 417 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ICKQ9UPZ9 632 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 PCDHGA6Q9Y5G7 932 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 KCNMB2Q9Y691 235 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 MED13Q9UHV7 2174 aa9.36□□□□□ -0.91
NPLOC4-212ENST00000573328 ASH1LQ9NR48 2969 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 E7EQ34 232 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TERTO14746 1132 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 CEP104O60308 925 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 FGGP02679 453 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 ZSCAN5DPP0CG00 497 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 UGT2B7P16662 529 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 NR1D1P20393 614 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 PTPN4P29074 926 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 CSRP3P50461 194 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TERF1P54274 439 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 ITGA1P56199 1179 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 PLOD1Q02809 727 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 HSPA14Q0VDF9 509 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 ABRQ12979 859 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TMED2Q15363 201 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 CCNG2Q16589 344 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 DEFB110Q30KQ9 67 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 ZNF658BQ4V348 819 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 PRAMEF17Q5VTA0 474 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 SPESP1Q6UW49 350 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 SYVN1Q86TM6 617 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TRIM73Q86UV7 250 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TBC1D21Q8IYX1 336 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 ADGRF3Q8IZF5 1079 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 C19orf47Q8N9M1 422 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TRIM58Q8NG06 486 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 OR1L3Q8NH93 324 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 OR5K2Q8NHB8 316 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 CFAP61Q8NHU2 1237 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 ZNF778Q96MU6 729 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TRAPPC9Q96Q05 1148 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 GPR87Q9BY21 358 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 CHST8Q9H2A9 424 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 AKIRIN1Q9H9L7 192 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 POLG2Q9UHN1 485 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms