RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DLG1Q12959 904 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 DMP1Q13316 513 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 DRP2Q13474 957 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 BIRC3Q13489 604 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 TRPC3Q13507 836 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 PRPF4BQ13523 1007 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 CAMK1Q14012 370 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 DHX34Q14147 1143 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 SLC39A14Q15043 492 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 STK38Q15208 465 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 TAF11Q15544 211 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 EPC2Q52LR7 807 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 TMEM81Q6P7N7 255 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 CCDC73Q6ZRK6 1079 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 TMCO2Q7Z6W1 182 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 FAM228AQ86W67 206 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 KIAA2013Q8IYS2 634 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 LRRC43Q8N309 656 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 SYT2Q8N9I0 419 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 MYRIPQ8NFW9 859 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 URGCPQ8TCY9 931 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 P2RX5Q93086 422 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 SCMH1Q96GD3 660 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 ZC3HAV1LQ96H79 300 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 ADGRG7Q96K78 797 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 GUCD1Q96NT3 240 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 ADPGKQ9BRR6 497 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 TMEM117Q9H0C3 514 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 POLR3FQ9H1D9 316 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 AGPAT5Q9NUQ2 364 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 PRMT7Q9NVM4 692 aaPredicted RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 PPP1R14DQ9NXH3 145 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 LARSQ9P2J5 1176 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 MTUS1Q9ULD2 1270 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 MTMR6Q9Y217 621 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 PIN4Q9Y237 131 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 DOCK5Q9H7D0 1870 aa4.02□□□□□ -1.77
NUP88-202ENST00000570937 MYH9P35579 1960 aaKnown RBP4.02□□□□□ -1.77
NUP88-202ENST00000570937 TANC1Q9C0D5 1861 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 A0A087WWV3 80 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 A0A1B0GUA9 196 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 PLSCR5A0PG75 271 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 MAGEA13PA6NCF6 341 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 PP2D1A8MPX8 630 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 NPIPB11E5RHQ5 1161 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 E9PMD0 336 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 C5orf67F2Z3F1 127 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TSPAN1O60635 241 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TBCAO75347 108 aaKnown RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 CSDE1O75534 798 aaKnown RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 YEATS4O95619 227 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 GALTP07902 379 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 SNRNP70P08621 437 aaKnown RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 PLA2G4BP0C869 781 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CD58P19256 250 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 AGAP20933 346 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 GLRA2P23416 452 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CNTFP26441 200 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CTNNB1P35222 781 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 PIGAP37287 484 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 POU3F1Q03052 451 aaPredicted RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 MBTD1Q05BQ5 628 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 SNTA1Q13424 505 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 GPM6BQ13491 265 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 SF3B4Q15427 424 aaKnown RBP eCLIP4.01□□□□□ -1.773e-9■■■■□ 22.6
NUP88-202ENST00000570937 IL17AQ16552 155 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 BAK1Q16611 211 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TCTN1Q2MV58 587 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TMEM95Q3KNT9 176 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 HYIQ5T013 277 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TXNDC8Q6A555 127 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 SLC27A1Q6PCB7 646 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 RHBDF2Q6PJF5 856 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 GPAT4Q86UL3 456 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 ZC3HC1Q86WB0 502 aaKnown RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 ZNF354CQ86Y25 554 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 ECHDC2Q86YB7 292 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 THNSL1Q8IYQ7 743 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 IQUBQ8NA54 791 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 KCNG4Q8TDN1 519 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 ERGIC1Q969X5 290 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 ZNF689Q96CS4 500 aaPredicted RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 MRPL38Q96DV4 380 aaKnown RBP4.01□□□□□ -1.77
NUP88-202ENST00000570937 BICD1Q96G01 975 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CCDC34Q96HJ3 373 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 IGSF21Q96ID5 467 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 LMLNQ96KR4 655 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TCHPQ9BT92 498 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 ANP32EQ9BTT0 268 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CCSER1Q9C0I3 900 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CUEDC2Q9H467 287 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 XPNPEP1Q9NQW7 623 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 C20orf141Q9NUB4 165 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 RRN3Q9NYV6 651 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 SLCO3A1Q9UIG8 710 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 KCNG2Q9UJ96 466 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 ODF2LQ9ULJ1 636 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 TBX20Q9UMR3 447 aa4.01□□□□□ -1.77
NUP88-202ENST00000570937 CLIC4Q9Y696 253 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms