RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 DENND6AQ8IWF6 608 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 SLC41A2Q96JW4 573 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 TCF12Q99081 682 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 KRT12Q99456 494 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 TSSK1BQ9BXA7 367 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 SRMSQ9H3Y6 488 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 PRORYQ9H606 182 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 PLAC1Q9HBJ0 212 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 CPNE5Q9HCH3 593 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 FBXO8Q9NRD0 319 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 ICKQ9UPZ9 632 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 ASF1AQ9Y294 204 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 PIEZO2Q9H5I5 2752 aa13.02□□□□□ -0.32
RPAIN-207ENST00000570883 SEC31AO94979 1220 aaKnown RBP13.02□□□□□ -0.33
RPAIN-207ENST00000570883 S1PR4O95977 384 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 APOA4P06727 396 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 NELFEP18615 380 aaKnown RBP13.02□□□□□ -0.33
RPAIN-207ENST00000570883 PGAM1P18669 254 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 CD82P27701 267 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 CASQ1P31415 396 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 FMO4P31512 558 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 SLC1A2P43004 574 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 ADARP55265 1226 aaKnown RBP13.02□□□□□ -0.33
RPAIN-207ENST00000570883 CRYMQ14894 314 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 MORF4L2Q15014 288 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 LONRF1Q17RB8 773 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 DCAF12Q5T6F0 453 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 FBXO38Q6PIJ6 1188 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 PCGF5Q86SE9 256 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 SDCCAG8Q86SQ7 713 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-207ENST00000570883 VASH2Q86V25 355 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 ADGRF3Q8IZF5 1079 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 SPATA4Q8NEY3 305 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 ASZ1Q8WWH4 475 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 UBXN4Q92575 508 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 RNF31Q96EP0 1072 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 PANX3Q96QZ0 392 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 CD180Q99467 661 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 EBNA1BP2Q99848 306 aaKnown RBP13.02□□□□□ -0.33
RPAIN-207ENST00000570883 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 TRIM31Q9BZY9 425 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 SPRY4Q9C004 299 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 TWSG1Q9GZX9 223 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 GALPQ9UBC7 116 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 PLAGL1Q9UM63 463 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 CRYL1Q9Y2S2 319 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 MED16Q9Y2X0 877 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 FAM169AQ9Y6X4 670 aa13.02□□□□□ -0.33
RPAIN-207ENST00000570883 BOD1L1Q8NFC6 3051 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 STMND1H3BQB6 276 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 EFSO43281 561 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 ESR1P03372 595 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 FOLR1P15328 257 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 ITGA8P53708 1063 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 TMPRSS3P57727 454 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 CXADRP78310 365 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 MPP1Q00013 466 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 FOXM1Q08050 763 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 C2orf54Q08AI8 447 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 CTBP1Q13363 440 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 GRB7Q14451 532 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 GBX1Q14549 363 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 TMED2Q15363 201 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 BBS9Q3SYG4 887 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 DNAJC21Q5F1R6 531 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 BROXQ5VW32 411 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 ZNF549Q6P9A3 640 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 CEACAM20Q6UY09 585 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 TBC1D21Q8IYX1 336 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 FAM136AQ96C01 138 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 SNF8Q96H20 258 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 OR6C1Q96RD1 312 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 MENTQ9BUN1 341 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 PITPNM3Q9BZ71 974 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 TRIT1Q9H3H1 467 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 C20orf96Q9NUD7 363 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 INTS10Q9NVR2 710 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 PILRAQ9UKJ1 303 aa13.01□□□□□ -0.33
RPAIN-207ENST00000570883 RUVBL2Q9Y230 463 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 TDRKHQ9Y2W6 561 aaKnown RBP13.01□□□□□ -0.33
RPAIN-207ENST00000570883 MDC1Q14676 2089 aaKnown RBP13□□□□□ -0.33
RPAIN-207ENST00000570883 GSAPA4D1B5 854 aa13□□□□□ -0.33
RPAIN-207ENST00000570883 EFCAB8A8MWE9 144 aa13□□□□□ -0.33
RPAIN-207ENST00000570883 POLR1CO15160 346 aaPredicted RBP13□□□□□ -0.33
RPAIN-207ENST00000570883 TIAF1O95411 115 aa13□□□□□ -0.33
RPAIN-207ENST00000570883 DLGAP3O95886 979 aa13□□□□□ -0.33
RPAIN-207ENST00000570883 EBLN1P0CF75 366 aa13□□□□□ -0.33
RPAIN-207ENST00000570883 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
RPAIN-207ENST00000570883 ZNF28P17035 718 aa13□□□□□ -0.33
RPAIN-207ENST00000570883 WT1P19544 449 aaPredicted RBP13□□□□□ -0.33
RPAIN-207ENST00000570883 RPL21P46778 160 aaKnown RBP13□□□□□ -0.33
RPAIN-207ENST00000570883 UCNP55089 124 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms